Gene BamMC406_5990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5990 
Symbol 
ID6181942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp544127 
End bp545365 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID641689120 
Producthypothetical protein 
Protein accessionYP_001815979 
Protein GI172065267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.838445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACAG CCAATCGTGG AGTGCGCTAT CGCGCCAAAC GCTGTGCTCA ATGGCTGACA 
GCGGACCGGA TCATTCCGTA CAGCTGCATC ATGCTGATGC TCTGTGTTGG ATTCCTGATC
ACGTGGGGCG CCGTCACCAA TACCTTCACG TCGCAAACCA CCGCCCGGCC GGGCGTCGAC
TTCTCCGTCT TCTGGACCGC ATCGCAACTC GTGCTGCAAG GCCATGCCGC AGCGATCTAC
GATCCGGTCT TCTTCTCTCA TGCCGAGGTA GCGCGGTTCG GTTCCTATCT GGGTCACCAA
TCGCTGCCCT GGCTTTATCC GCCGACGATG CTGCTGTTCG TCGCGCCGAT TGCCCTCGTG
CCTTTCCTGC CCGCGTATTT CCTCTTTTTT GCGGGCAGTC TTTTATGCTA TGCGTACGCC
GTGCTCCGAC TGTCGGGCCT GCGTGCGTAC CTGCCCGTTC CGCGCGCCGC CGCGCTCGTC
GTGCTCGCCT ATTCCGGCGT GTTCGCGTCC GTGCTGTATG GGCAGAACAG CATCCTGACC
GCCGGTATCG CCGCGCTCGC GCTGCATTTC GTCGGCCCGC GCCCGATCGT CGCCGGCGTG
CTGATCGGGC TGCTCGCCAT CAAGCCGCAG ATGGCGATGG TGTTTCCGTT CGTGCTGATC
GCGGCGCGTG CATGGCGCAC CTTCGCGGCG GCGGCGCTCA CGACCACGCT GTTCGTGGTG
GCCGGCATCG CGCTGACCGG AATCAGCTCG CTGACCGGCC TGGCCCACGC GATGTCGATC
GTGCGCGGCA TGCATTTCAC CCTGCCTGCC TACTGGTTCG TTTCACCGAC GACGTTCGCG
GCGCTGCGGC TCGCGGGTGC ATCGATTCCG ATCGCGCTCG CCGCGCAAGC CGCCGTCGGA
CTGCTCGCCA TCGCAGCCGC GGTCCATGTC TGGCGCCGCA CGACCGACAT GCGGCTGTGC
GGCGCGGCGC TGGCGGTCGC CGCGCTGTTG ACGACACCCT ATCTGTGGAG TTACGAACTG
GCGTGGCTCG GCATCGCGGT GTTCTGCGTA ATCGCTCACG GCCTGGAAGA CGGCTGGCTG
CCGGGAGATC AGATCGTGAT CGTGCTCGCG TGGCTGCTGC CGGTATTCGA GGTGTTCAAC
CGGATCTCGA AGCTGCCGCA GATCGGCCCG GTCGTGCTGC TCGCCGTCCT GTTCGTCGTC
GTGCGTCGCG CAAGCCTTGC GCCGCGGAGC GCACAATGA
 
Protein sequence
MYTANRGVRY RAKRCAQWLT ADRIIPYSCI MLMLCVGFLI TWGAVTNTFT SQTTARPGVD 
FSVFWTASQL VLQGHAAAIY DPVFFSHAEV ARFGSYLGHQ SLPWLYPPTM LLFVAPIALV
PFLPAYFLFF AGSLLCYAYA VLRLSGLRAY LPVPRAAALV VLAYSGVFAS VLYGQNSILT
AGIAALALHF VGPRPIVAGV LIGLLAIKPQ MAMVFPFVLI AARAWRTFAA AALTTTLFVV
AGIALTGISS LTGLAHAMSI VRGMHFTLPA YWFVSPTTFA ALRLAGASIP IALAAQAAVG
LLAIAAAVHV WRRTTDMRLC GAALAVAALL TTPYLWSYEL AWLGIAVFCV IAHGLEDGWL
PGDQIVIVLA WLLPVFEVFN RISKLPQIGP VVLLAVLFVV VRRASLAPRS AQ