Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5986 |
Symbol | |
ID | 6181938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 539803 |
End bp | 541242 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689116 |
Product | major facilitator transporter |
Protein accession | YP_001815975 |
Protein GI | 172065263 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA CCGTCACCGC GGATTCGCGT CCGCACGATT CGCCCTTCAT CGATGTCGAC GTCATGCCGG GCGCCGCGAT CGCCGCGCGC ATGGATCGGC TGCCGATCAC CCGCCATCTG TGGATGCTGG TGCTGCTGAT TTCACTGGGC GGCTTTTTCG AAGTCTACGA TCTGATCTTC ACCGGCTATA TCGCGCCGGG CATGGCGAAG AGCGGCGTGC TGCAAACCAC CACGCACGCG TTTTTCGGCT TCACCGGAAT CGCCGGCTTC ATCGCCGCGA CGTTCGCCGG CCTGTTCGTC GGCACGTTCG GGCTCGGCTG GATGCCCGAT CGCTACGGCC GGCGCGCGGT GTTCACGGTG TCGCTGCTCT GGTATTCGAT CGGCTCGGTG ATCATGGCAT TTCAGACGAC CGCCGAAGGC ATGATCCTCT GGCGCTTCAT CACGGGAATC GGCGTCGGGG TCGAGATCAT CACGATCGAC AGCTACGTGA CGGAACTCGT CCCGCAGCAG ATGCGTGGCC GCGCGATGGC GTTCAACCAG AGCGTGATGT TCGCGGCGGC GCCGGTCGCC GCGATCTTGT CGTACTGGCT GGTGCCGACC ACGATGCTCG GCATCGACGG ATGGCGGGTC GTGGTGCTCG CGGGCGCGCT CGGCGCGTTG CTGGTGTGGT TCATCCGGCG CGGCGTGCCG GAGAGTCCGC GGTGGCTCGC GATGCACGGA CAGGTCGCGA GGAGCGACGC GATCGTGCGG CACATCGAGG CGATCGTCGA ACGTCAGTCG GGGCAGCCGC TGCCGCCACC GTCACCGATC GTCGAACAGC CCCGGCATCG ACGCGCGTCG CTCGCGGAGT TGTGGCAGCC GCCGTATCGT TCGCGCCTCG TGATGCTGAT CGTCTTCAAC TTCTGCCAGG CGATCGGCTA TTACGGTTTC GCGAACTGGG TGCCGACACT GTTGATCAGC CAGGGCATCA CGGTCACGAA AAGCCTGCTC TATTCGTTCA TCATCGCGTT CGCGTTGCCG GTCGGGCCGC TGCTGGCGAT GGCCGTCGCC GACCGGATCC AGCGCAAATA CCTGATCGTC GGCGGCGCGC TGGTCGTGAT CGTCTGCGGG ACAGCGTTCG CGCAGGTCAG GGCCGTGGTG CCGCTCATCC TGCTCGGCGT GTTGATCAGC TTCGCCGGCC AGATCATCTC GGTGTGCTAC CACGCTTACC AGGCCGAGTT GTTCCCGACG GCCGTGCGGT GCCGCGCCAA TGGGATCGTG TACTCGGCCA GCCGGGTCGG CGCGATGATG TCGGGTTTTG CGATCGCGTT CCTGCTTCGC GATTTCGGGT TGCCCGGGGT ATTCGCCGGC ATCACGGCGT GCATGCTGGC GGTCGCGGTA TCGATCGGGT TCTTCGGGCC GAAGACCAAC GGCCTGCGCC TCGAGGAACT GAACCGTTGA
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Protein sequence | MQPTVTADSR PHDSPFIDVD VMPGAAIAAR MDRLPITRHL WMLVLLISLG GFFEVYDLIF TGYIAPGMAK SGVLQTTTHA FFGFTGIAGF IAATFAGLFV GTFGLGWMPD RYGRRAVFTV SLLWYSIGSV IMAFQTTAEG MILWRFITGI GVGVEIITID SYVTELVPQQ MRGRAMAFNQ SVMFAAAPVA AILSYWLVPT TMLGIDGWRV VVLAGALGAL LVWFIRRGVP ESPRWLAMHG QVARSDAIVR HIEAIVERQS GQPLPPPSPI VEQPRHRRAS LAELWQPPYR SRLVMLIVFN FCQAIGYYGF ANWVPTLLIS QGITVTKSLL YSFIIAFALP VGPLLAMAVA DRIQRKYLIV GGALVVIVCG TAFAQVRAVV PLILLGVLIS FAGQIISVCY HAYQAELFPT AVRCRANGIV YSASRVGAMM SGFAIAFLLR DFGLPGVFAG ITACMLAVAV SIGFFGPKTN GLRLEELNR
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