Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5984 |
Symbol | |
ID | 6181936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 537543 |
End bp | 538484 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641689114 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001815973 |
Protein GI | 172065261 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCTT TTCCCACCCA CGTCGTGATT CGCGAGGTCG GATTGCGCGA CGGCCTGCAA AGCATCCAGG CCGTTCTGCC GACCGCGCGC AAGCTCGAAT GGATCGCCGG TGCCTATGCG GTCGGCCAGC GCGAGATCGA AGTCGGCTCG TTCGTGCCGG CGCGGCTGCT GCCGCAACTG GCGGATACCG CCGAACTCGT CGCGTACGCG AAAACGCTGC CGGGCCTCGC CGTGTCGGTG CTGGTGCCGA ACCTGAAAGG CGCGCAGCGC GCGCTCGAAA CCGGCGCCGA CCTGCTGCTC GTGCCGTTGT CCGCGAGCCG CGAACATAGC CTCGCGAACC TGCGCAAGAC GCCCGATGAA GTCGTCGCCG AGGTCGCGCG CATCCGCGCC GAACGCGATG CCGCCGGGTC GACGACGTTG ATCGAAGGCG GCATCGGCAC GGCATTCGGC TGCACGATCC AGGGGCGCGT CGAATCGGAC GAGGTCCTGC GCTGCATGCA GGCGTTGCTC GATGCGGGCG CGGATCGCGT CAGCATCGCC GATACGGTCG GCTACGCGGG GCCGGCCGCC GTGCGCGCGC TGTTCGAGCG GGCGCGTCGC GTCGCCGGCG ATCGCTTCTT TTGCGGGCAC TTTCACGATA CGCGCGGCCT CGCGCTCGCC AACGTCTATG CCGCGCTCGA AACCGGCGTC GCGCGTTTCG ACGCGACGCT CGCCGGCATC GGCGGCTGCC CGCACGCGCC GGGCGCAAGC GGCAATGCGG CGAGCGAAGA CCTCGCGTTC ATGCTCGCCG ACATGGGCAT CGACACCGGC ATCGACCTGC AGGCGCTGCT GGCGCTGCGC GCGAAGGTCG CGCGCTGGCT CGACGGCGAA TCGCTGCACG GCGCGCTGTG GCGGGCCGGC CTGCCGAAAA CCCATCGCGC GTCGATCGCG CTCAATGCCT GA
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Protein sequence | MRSFPTHVVI REVGLRDGLQ SIQAVLPTAR KLEWIAGAYA VGQREIEVGS FVPARLLPQL ADTAELVAYA KTLPGLAVSV LVPNLKGAQR ALETGADLLL VPLSASREHS LANLRKTPDE VVAEVARIRA ERDAAGSTTL IEGGIGTAFG CTIQGRVESD EVLRCMQALL DAGADRVSIA DTVGYAGPAA VRALFERARR VAGDRFFCGH FHDTRGLALA NVYAALETGV ARFDATLAGI GGCPHAPGAS GNAASEDLAF MLADMGIDTG IDLQALLALR AKVARWLDGE SLHGALWRAG LPKTHRASIA LNA
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