Gene BamMC406_5984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5984 
Symbol 
ID6181936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp537543 
End bp538484 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content70% 
IMG OID641689114 
Productpyruvate carboxyltransferase 
Protein accessionYP_001815973 
Protein GI172065261 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTT TTCCCACCCA CGTCGTGATT CGCGAGGTCG GATTGCGCGA CGGCCTGCAA 
AGCATCCAGG CCGTTCTGCC GACCGCGCGC AAGCTCGAAT GGATCGCCGG TGCCTATGCG
GTCGGCCAGC GCGAGATCGA AGTCGGCTCG TTCGTGCCGG CGCGGCTGCT GCCGCAACTG
GCGGATACCG CCGAACTCGT CGCGTACGCG AAAACGCTGC CGGGCCTCGC CGTGTCGGTG
CTGGTGCCGA ACCTGAAAGG CGCGCAGCGC GCGCTCGAAA CCGGCGCCGA CCTGCTGCTC
GTGCCGTTGT CCGCGAGCCG CGAACATAGC CTCGCGAACC TGCGCAAGAC GCCCGATGAA
GTCGTCGCCG AGGTCGCGCG CATCCGCGCC GAACGCGATG CCGCCGGGTC GACGACGTTG
ATCGAAGGCG GCATCGGCAC GGCATTCGGC TGCACGATCC AGGGGCGCGT CGAATCGGAC
GAGGTCCTGC GCTGCATGCA GGCGTTGCTC GATGCGGGCG CGGATCGCGT CAGCATCGCC
GATACGGTCG GCTACGCGGG GCCGGCCGCC GTGCGCGCGC TGTTCGAGCG GGCGCGTCGC
GTCGCCGGCG ATCGCTTCTT TTGCGGGCAC TTTCACGATA CGCGCGGCCT CGCGCTCGCC
AACGTCTATG CCGCGCTCGA AACCGGCGTC GCGCGTTTCG ACGCGACGCT CGCCGGCATC
GGCGGCTGCC CGCACGCGCC GGGCGCAAGC GGCAATGCGG CGAGCGAAGA CCTCGCGTTC
ATGCTCGCCG ACATGGGCAT CGACACCGGC ATCGACCTGC AGGCGCTGCT GGCGCTGCGC
GCGAAGGTCG CGCGCTGGCT CGACGGCGAA TCGCTGCACG GCGCGCTGTG GCGGGCCGGC
CTGCCGAAAA CCCATCGCGC GTCGATCGCG CTCAATGCCT GA
 
Protein sequence
MRSFPTHVVI REVGLRDGLQ SIQAVLPTAR KLEWIAGAYA VGQREIEVGS FVPARLLPQL 
ADTAELVAYA KTLPGLAVSV LVPNLKGAQR ALETGADLLL VPLSASREHS LANLRKTPDE
VVAEVARIRA ERDAAGSTTL IEGGIGTAFG CTIQGRVESD EVLRCMQALL DAGADRVSIA
DTVGYAGPAA VRALFERARR VAGDRFFCGH FHDTRGLALA NVYAALETGV ARFDATLAGI
GGCPHAPGAS GNAASEDLAF MLADMGIDTG IDLQALLALR AKVARWLDGE SLHGALWRAG
LPKTHRASIA LNA