| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5981 |
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| Symbol | |
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| ID | 6181933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 533099 |
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| End bp | 534907 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689111 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001815970 |
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| Protein GI | 172065258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGGCA CCTACGATCC GCTGCTTGTC CTGCTGTCGC TCGTCATCGC GACGCTGGCC
TCCTATACGG CGCTCGACCT GGCCGCGTTC ATTTCGCTGC TCGACAACCC GAAGCTCAAG
CGCGCATGGC TGGGCGGCGG CGCGGCCGCG ATGGGCACCG GCATCTGGTC GATGCATTTC
GTCGGCATGC TGGCGCTGTC GCTGCCGATC CCGCTCGGCT ATGCGCTGCC GGATACCGTC
GCGTCGCTCG TCATCGCGGT GCTCGTGTCG TATTTCGCGC TGAACATCGT CACGCGTGCA
CGGTTGAGCC GCCGGCGCCT GCTCGCGGGC GGCGCGCTGA TGGGCGCCGG GATCGTCGGG
ATGCATTACA CGGGGATGGC CGCGATGCGC ATGGCGCCGG GCATTCGCTA CGATCCCGTG
CTGTTCGCGG CGTCGATCGG CATCGCGGTG ATCGCGTCGA CCGCCGCGCT CTGGATGGCG
CAGGCGCTGC GCGTGCAACA GGCGCGCCAC GCGACCGCGC TGCGCATCGG TGCGGCGCTG
ATCATGGGCA TCGCCATCAC GGGCATGCAC TACACGGCGA TGGCGGCCGC GCATTTCGCG
CTGGATGCGC GATGCGGCGC GGCGAACGGG ATCGATGGGC CGTGGCTTGC GACGACGATC
GCGCTGTTCA CGACGGCGAC GCTGATCGTC ACGCTGCTGG TGTCCCGTTT CGATGCGCGG
ACAACCTTTC TGCGCGGGAT GACGGATACG CTCGAGCGGC TGGTGCGTGT GCGGACCGCG
GAACTCGAAA CGGCGTTGCG ACGCTACGAG CAGACGACGG CGATGCTGCA GCGCACCCGC
GAAAACATGG CGACCGAGAT CGACGAGCGC AAGGCGGCGC AGATCCGGCT CGAGCAGGAG
AAGGACGAAC AGCGGCGCCT GCTGCGGGCG CTCGAGGAAA CGCACGTGCA GCTGCTGCAG
TCGGAAAAAC TCGCATCGAT CGGCCAGCTC GCGGCCGGCG TCGCGCACGA GATCAACAAT
CCGGTCGGCT TCATCAGCGC GAACCTCAAC ACGCTGAAGA CGTGGGTACG CAGCCTGCTC
GACGTGATCG CCGCGCACGA GGCCGCGCTG CCGCAGCTGG AACCCGCCCA ACGCGACGCG
CTGGCCGCGA TGGGGCGCGC CGCCGATCTG GACTACGTGC GCGACGAGAT CGCGACGCTG
ATCGACGAGT CGATCGACGG CGCGCTGCGG GTGCGGCGGA TCGTGCAGGA CCTGCGTGAT
TTCTCGCGGC CGGGCAGCGG AGAATGGTGC GTCGCCGACA TCCACGCGGG CCTCGAGAGC
ACGCTCAACG TCGTCCACAA CGAACTCAAG TACAAGGCCG ACATCGTGCG CGAGTACGGT
GACCTGCCGC CCGTCGAATG CCTGCCGTCG CAATTGAACC AGGTGTTCAT GAACCTGCTC
GTCAACGCGG CGCACGCGAT TCCCGAGCGC GGCGTGATCA CGATCCATAC GTCGAGCGAC
GACGAACAGG TGTCGATCGC GATCAGCGAC ACCGGCACCG GCATGACGCC CGACATCGTG
CGGCGGATCT TCGATCCGTT CTTCACGACG AAGCCGGTCG GGCAGGGCAC GGGGCTCGGC
TTGTCGGTGT CGCACGGCAT CGTCGAGCGC CACCGCGGCA CAATCGACGT GACGAGCGAG
CCGGGGCGCG GTACCACCTT CCGCATTCGG CTGCCGATCC GGCGCGCAGA GACGAGCGCG
AGCGAGAGCG CGAGCGAGAG CGAGAGCATG AGCATGAGCG AGACGGCGGC AGTCGGGCAG
CGCGCGTGA
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| Protein sequence | MHGTYDPLLV LLSLVIATLA SYTALDLAAF ISLLDNPKLK RAWLGGGAAA MGTGIWSMHF
VGMLALSLPI PLGYALPDTV ASLVIAVLVS YFALNIVTRA RLSRRRLLAG GALMGAGIVG
MHYTGMAAMR MAPGIRYDPV LFAASIGIAV IASTAALWMA QALRVQQARH ATALRIGAAL
IMGIAITGMH YTAMAAAHFA LDARCGAANG IDGPWLATTI ALFTTATLIV TLLVSRFDAR
TTFLRGMTDT LERLVRVRTA ELETALRRYE QTTAMLQRTR ENMATEIDER KAAQIRLEQE
KDEQRRLLRA LEETHVQLLQ SEKLASIGQL AAGVAHEINN PVGFISANLN TLKTWVRSLL
DVIAAHEAAL PQLEPAQRDA LAAMGRAADL DYVRDEIATL IDESIDGALR VRRIVQDLRD
FSRPGSGEWC VADIHAGLES TLNVVHNELK YKADIVREYG DLPPVECLPS QLNQVFMNLL
VNAAHAIPER GVITIHTSSD DEQVSIAISD TGTGMTPDIV RRIFDPFFTT KPVGQGTGLG
LSVSHGIVER HRGTIDVTSE PGRGTTFRIR LPIRRAETSA SESASESESM SMSETAAVGQ
RA
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