Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5972 |
Symbol | |
ID | 6182264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 523723 |
End bp | 525111 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689102 |
Product | major facilitator transporter |
Protein accession | YP_001815961 |
Protein GI | 172065249 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATA CCGTCAATGC CGCCGGCCGG CTCGACCGGC TGCCCGTTTC AAGGTTCCAC TGGAAGATCC TCGGGCTGAT CGCCGGCGGC GCGTTCCTCG ACGCATTCGA CATCTATCTC GCCAACGGCT CGGTCGCGTC GATGGTCAAG GACGGCTTCA CCGATCTGCG GCATGGCGCG ATGTTCGTGT CGTCGACGTT CGTCGGGATG ATGATCGGCG CGTTCGTCGC GGGGTATGTC GGTGACCGGC TCGGGCGGCG GTATTCGTAT CAGCTCAATC TCGCGGTGTT CGGGCTCGCG TCGATCGCCG CATGTTTTGC GCCTGACATC GAGTGGTTGA TCGTGCTGCG GTTCATCATG GGGATCGGGC TCGGCGCGGA ACTGGTCGTT GCAGCCGGGA CGCTCGCCGA GTTCGTGCCG CCCCACACGC GCGGGAAGTG GGTGTCGCTG CTGGCGATCA TTACCAACAG CGGGTTGTTC GCCGCGCTGG CCGCGGGGTA CTGGATCATT CCGCATCTCG GCTGGCGCTA TATGTTCGCA CTGGCCGGTA TCGGTGCGCT GGTCGTGTGG TTCATGCGCA AGCGGATGCC GGAATCGCCG CGCTGGCTCG AGTCCGTCGG GCGGCTCGAC GAGGCGGAGG CGACGCTGGC CGCGATCGAG CAGGAGGTGA GCAAGCAGGT CGGCGCGCTG CCGCCGGTGC GGCGCACCGT GGATCTGCAT GTCGGGAAGG TGCCGCTCAG CGTGCTGTTT TCGAAGGCGA TGCGTGGGCG CATGGCGGTC GCCGCGCTGA CCGCGATCGG CGTGAACGTT GGACTCTATG GCTTCATCGC GTGGCTGCCG ACGTTTTTCG TCACGCAGGG GTTGTCGGTC GTCAAGTCGC TCGGCTTCGT GTTCCTGATG TCGATCGGGT CGCCGGTCGG CGGGTTGATC GGGTATCTGA TCGCGGACCG GATCGGCCGT GCGAGGGGAA TCGTGATCGC TTCGATTCTG AGCATCGCGC TTGGCTGGCT GTATGTGTCG CTGCGCGACA CCACGGCGAT CATTCTGGTC GGGTTCTGTC TCGTCAGTGC GATCTATACG ATCACGACGC TCGGGCTATT TGGGTATATC CCGGAGCTGT TTCCGACCGA GGTTCGGCTG CGTGGCACGG GCGTCGCGGG GATGTGCGGG CGGATGTCGT CGATCGGGAC GCCCGCGCTG GCACTCGCGC TTTATCAGGC GTTCGGCGTG TCAGGCGTGA TCGCGATGGT CAGCGCGACA CTCGGCGTAC TGTGTGTCGC GATCGGGTTG CTGCGGGTTG AAACGGGGCG GCAAGCGCTC GAGGAAGTTG CACCGGGGAC GAGCGACGCG GATGGCGCGG CCGTCGCGAC GCGGGTGACG CAAGTTTGA
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Protein sequence | MANTVNAAGR LDRLPVSRFH WKILGLIAGG AFLDAFDIYL ANGSVASMVK DGFTDLRHGA MFVSSTFVGM MIGAFVAGYV GDRLGRRYSY QLNLAVFGLA SIAACFAPDI EWLIVLRFIM GIGLGAELVV AAGTLAEFVP PHTRGKWVSL LAIITNSGLF AALAAGYWII PHLGWRYMFA LAGIGALVVW FMRKRMPESP RWLESVGRLD EAEATLAAIE QEVSKQVGAL PPVRRTVDLH VGKVPLSVLF SKAMRGRMAV AALTAIGVNV GLYGFIAWLP TFFVTQGLSV VKSLGFVFLM SIGSPVGGLI GYLIADRIGR ARGIVIASIL SIALGWLYVS LRDTTAIILV GFCLVSAIYT ITTLGLFGYI PELFPTEVRL RGTGVAGMCG RMSSIGTPAL ALALYQAFGV SGVIAMVSAT LGVLCVAIGL LRVETGRQAL EEVAPGTSDA DGAAVATRVT QV
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