Gene BamMC406_5972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5972 
Symbol 
ID6182264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp523723 
End bp525111 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content65% 
IMG OID641689102 
Productmajor facilitator transporter 
Protein accessionYP_001815961 
Protein GI172065249 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATA CCGTCAATGC CGCCGGCCGG CTCGACCGGC TGCCCGTTTC AAGGTTCCAC 
TGGAAGATCC TCGGGCTGAT CGCCGGCGGC GCGTTCCTCG ACGCATTCGA CATCTATCTC
GCCAACGGCT CGGTCGCGTC GATGGTCAAG GACGGCTTCA CCGATCTGCG GCATGGCGCG
ATGTTCGTGT CGTCGACGTT CGTCGGGATG ATGATCGGCG CGTTCGTCGC GGGGTATGTC
GGTGACCGGC TCGGGCGGCG GTATTCGTAT CAGCTCAATC TCGCGGTGTT CGGGCTCGCG
TCGATCGCCG CATGTTTTGC GCCTGACATC GAGTGGTTGA TCGTGCTGCG GTTCATCATG
GGGATCGGGC TCGGCGCGGA ACTGGTCGTT GCAGCCGGGA CGCTCGCCGA GTTCGTGCCG
CCCCACACGC GCGGGAAGTG GGTGTCGCTG CTGGCGATCA TTACCAACAG CGGGTTGTTC
GCCGCGCTGG CCGCGGGGTA CTGGATCATT CCGCATCTCG GCTGGCGCTA TATGTTCGCA
CTGGCCGGTA TCGGTGCGCT GGTCGTGTGG TTCATGCGCA AGCGGATGCC GGAATCGCCG
CGCTGGCTCG AGTCCGTCGG GCGGCTCGAC GAGGCGGAGG CGACGCTGGC CGCGATCGAG
CAGGAGGTGA GCAAGCAGGT CGGCGCGCTG CCGCCGGTGC GGCGCACCGT GGATCTGCAT
GTCGGGAAGG TGCCGCTCAG CGTGCTGTTT TCGAAGGCGA TGCGTGGGCG CATGGCGGTC
GCCGCGCTGA CCGCGATCGG CGTGAACGTT GGACTCTATG GCTTCATCGC GTGGCTGCCG
ACGTTTTTCG TCACGCAGGG GTTGTCGGTC GTCAAGTCGC TCGGCTTCGT GTTCCTGATG
TCGATCGGGT CGCCGGTCGG CGGGTTGATC GGGTATCTGA TCGCGGACCG GATCGGCCGT
GCGAGGGGAA TCGTGATCGC TTCGATTCTG AGCATCGCGC TTGGCTGGCT GTATGTGTCG
CTGCGCGACA CCACGGCGAT CATTCTGGTC GGGTTCTGTC TCGTCAGTGC GATCTATACG
ATCACGACGC TCGGGCTATT TGGGTATATC CCGGAGCTGT TTCCGACCGA GGTTCGGCTG
CGTGGCACGG GCGTCGCGGG GATGTGCGGG CGGATGTCGT CGATCGGGAC GCCCGCGCTG
GCACTCGCGC TTTATCAGGC GTTCGGCGTG TCAGGCGTGA TCGCGATGGT CAGCGCGACA
CTCGGCGTAC TGTGTGTCGC GATCGGGTTG CTGCGGGTTG AAACGGGGCG GCAAGCGCTC
GAGGAAGTTG CACCGGGGAC GAGCGACGCG GATGGCGCGG CCGTCGCGAC GCGGGTGACG
CAAGTTTGA
 
Protein sequence
MANTVNAAGR LDRLPVSRFH WKILGLIAGG AFLDAFDIYL ANGSVASMVK DGFTDLRHGA 
MFVSSTFVGM MIGAFVAGYV GDRLGRRYSY QLNLAVFGLA SIAACFAPDI EWLIVLRFIM
GIGLGAELVV AAGTLAEFVP PHTRGKWVSL LAIITNSGLF AALAAGYWII PHLGWRYMFA
LAGIGALVVW FMRKRMPESP RWLESVGRLD EAEATLAAIE QEVSKQVGAL PPVRRTVDLH
VGKVPLSVLF SKAMRGRMAV AALTAIGVNV GLYGFIAWLP TFFVTQGLSV VKSLGFVFLM
SIGSPVGGLI GYLIADRIGR ARGIVIASIL SIALGWLYVS LRDTTAIILV GFCLVSAIYT
ITTLGLFGYI PELFPTEVRL RGTGVAGMCG RMSSIGTPAL ALALYQAFGV SGVIAMVSAT
LGVLCVAIGL LRVETGRQAL EEVAPGTSDA DGAAVATRVT QV