| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5967 |
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| Symbol | |
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| ID | 6182259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 518242 |
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| End bp | 519675 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641689097 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001815956 |
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| Protein GI | 172065244 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTG CCTCGCTCGG CCTGATCGCC CCCTTGCTGC GTAATCTGCA GGACCTCAAT
TACCAGACAC CTACGCCGGT GCAGGTCAAG GCGATTCCCG CGGTGCTCGG CGGCAAGGAC
GTGATGGCCG GCGCGCAGAC CGGCACAGGC AAGACCGCGG GTTTCGCGCT GCCGCTGTTG
CAGCGGCTCG TGCAACAGGG CCCGGCGGTG TCCAGCAACC GCGCGCGGGT TCTGGTGCTG
GTGCCGACGC GTGAGCTGGC CGAGCAGGTG CTGCAAAGCT TTGTCGCGTA TGGCAAGGGC
CTCGACTTGC GATTTCTGGC CGCCTACGGC GGCGTGAGCA TCAACCCGCA GATGATGAAG
TTGCGCAAAG GCGTCGATGT GCTCGTTGCG ACGCCGGGTC GTCTGCTGGA TCTCAACCGC
CAGAATGCGG TGCAGTTCGA TCAGGTCGAA ACGCTGGTGC TGGACGAGGC CGACCGCATG
CTCGATCTGG GCTTCGCGCG TGAGCTCAAT GCCGTCTTTG CCGCGCTGCC CGTTCAGCGC
CAGACCCTGC TGTTCTCCGC GACGTTTACC GACGATATCC GCACGATGGC GGCGAGCATT
CTGCGCAGCC CGGTCAATAT CAGCGTCAGC CCGCCCAATG TCACGGCGAG CAAGATCAAG
CAGTGGGTGG TGACGGTCGA CAAGCGGAAC AAGCCGGACC TCTTCATGCA CCTGGTGGCC
GAGAACAACT GGGATCACGC GCTGGTGTTC GTCAAGACCC GCAATGGCGT GGATTATCTG
GCGGCCATGC TGGACGAGGC GGGCTATGCG GTCGACACGA TCCACGGCGA CAAACCGCAA
CCCGCGCGGC TGCGTGCGCT CGAGCGCTTC AAGACGGGCG AAGTGCAGAT GCTGGTGGCC
ACCGATGTGG CAGCCCGCGG GCTGGATATC GATGACTTGC CGCTCGTGAT CAACGTCGAT
CTGCCGATCG TCGCGCAGGA TTACGTGCAC CGGATCGGGC GTACCGGGCG CGCGGGTGCG
AGCGGCGTGG CCGTATCTCT CGTGTGTGCG GATGAAGCCC CGCAACTGGC CGCGATCGAA
GCGTTGATCG GGCAGACGCT GCGCCGCGAA GAAGAGCCGG GGTTTGAAGC GGAACACCGC
GTGCCGGAAA CCAGCTCGAC GGGGCAGATG ATCAAGAAGC CTAAAAAGCC GAAGAAGCCC
AAAGTGCCGC ACGGTGGGGC GGCGGCCATG CCGGTGGCCG GGAAAAAGCC GCGGCCGCAA
GGCGGTGACG GCAAGCGCAA GGGTGGCGGG GCCGCGGGCA AGGGCGCAAG CGTGTTGAAC
GGTAGCCCGT TCAGCGTGCA AAAACCGCGC GGCAAAGGCA AACCCGCTGG CAAGGCGGTT
GCGGGAGCGC GTAAGCCGGC TGGGAAGTCT GCGGGTGGTC GCGGTAAACA CTAA
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| Protein sequence | MSFASLGLIA PLLRNLQDLN YQTPTPVQVK AIPAVLGGKD VMAGAQTGTG KTAGFALPLL
QRLVQQGPAV SSNRARVLVL VPTRELAEQV LQSFVAYGKG LDLRFLAAYG GVSINPQMMK
LRKGVDVLVA TPGRLLDLNR QNAVQFDQVE TLVLDEADRM LDLGFARELN AVFAALPVQR
QTLLFSATFT DDIRTMAASI LRSPVNISVS PPNVTASKIK QWVVTVDKRN KPDLFMHLVA
ENNWDHALVF VKTRNGVDYL AAMLDEAGYA VDTIHGDKPQ PARLRALERF KTGEVQMLVA
TDVAARGLDI DDLPLVINVD LPIVAQDYVH RIGRTGRAGA SGVAVSLVCA DEAPQLAAIE
ALIGQTLRRE EEPGFEAEHR VPETSSTGQM IKKPKKPKKP KVPHGGAAAM PVAGKKPRPQ
GGDGKRKGGG AAGKGASVLN GSPFSVQKPR GKGKPAGKAV AGARKPAGKS AGGRGKH
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