| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5959 |
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| Symbol | |
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| ID | 6182251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 509028 |
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| End bp | 509732 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689089 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001815948 |
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| Protein GI | 172065236 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTCAAT GGGAGCAGTC GGGTTCGGGT TCGCGCCATG CGGTCGTGAC GGGCGTGTCG
TCGGGAATTG GACGGGCGAT CGTCGACCGT CTGCTCGCCG ACGGCTGGCG CGTCACGGGA
CTGTGCCGCT CGCGCATTGA AACGGCCGAT GGGTCCCTGA CCATCGTGCC GGTCGACGTC
ACCGACTTCG CGGCACTCGG GCCCGTGTGC GATGCACTGG GTGCGGTGGA CGCGCTGGTG
CATGCGGCCG GCTTCATGCG TACCGCGCCG CTCGGTCAGC TTTCACACGA GGACGGCGCG
GCAATGTGGC GCCTGCACGT TGAGTCCGCA ACCTTTCTCG CCGATCGTCT GGTGCCCCGG
ATGCCCGCCG GCGGACGCAT CGTGCTGCTG GGCAGCCGCA CCGCCAACGG CGCGGCCACG
CGCAGCCAGT ATGCGGCAAC CAAATCCGCG CTGGTCGGCC TGGCGCGATC GTGGGCCGCG
GAACTCGCGC CGCAGCGCAT CACCGTCAAT GTCGTCGCCC CCGGCGCGAC GGACACGCCG
TTTCTGCGCG ATCCGGCGCG CGCAGCAACG CCCCCGAAAC TTCCGCCGAT CGGGCGATTC
ATCACGCCCG AGGAAGTCGC CGCGCTGACC GGCTTCCTGT TGAGCGCGGA TGCGAGCGCG
ATTACGGGGC AGCAGATCGT CATGTGTGGT GGCGCGTCGC TTTAA
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| Protein sequence | MGQWEQSGSG SRHAVVTGVS SGIGRAIVDR LLADGWRVTG LCRSRIETAD GSLTIVPVDV
TDFAALGPVC DALGAVDALV HAAGFMRTAP LGQLSHEDGA AMWRLHVESA TFLADRLVPR
MPAGGRIVLL GSRTANGAAT RSQYAATKSA LVGLARSWAA ELAPQRITVN VVAPGATDTP
FLRDPARAAT PPKLPPIGRF ITPEEVAALT GFLLSADASA ITGQQIVMCG GASL
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