Gene BamMC406_5954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5954 
Symbol 
ID6182246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp503730 
End bp504212 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID641689084 
Producthypothetical protein 
Protein accessionYP_001815943 
Protein GI172065231 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA TCCGTTTTTG TACTGCTGCT CTCGCAGCCT GCGTCTCCTT TTTCACATTC 
ACCGCACCGG CCACCGCCGG CGGTGCGCAA CGTCCGCCCG AAGCGGCCAT CAAGGCCGAA
AACGCCCGAT GGGCGAATGC TTTTGCGCGC GGAGACTATG AGGAGATCGG CCGCCTCTAC
ACCGACGACG GCACGCTCTT GCCGCCCGGT GGCGACAAAG TCATCGGGAG CCGCGCGATC
GCCGAGTACT TCACCAAGGG CTATGCCGGA ACGAAACCGG GCACCGTATC GTTCAGCCAT
TACGAGTTCT ACGGTGACGA CCGGATGGTG ACGGAGGTGT CGGATGCGGA GGTGCGCGAT
CACGATGGAA AGCTCAAGAT CCGCGCCAAG CAGATCCTCG TGTTTGTGAA GCAGGCCGGC
GAGTGGAAGC TGCATCGCGA CATGTGGAAC GACTACCCTC CGGTCAAAAC CGCCGACCAT
TAA
 
Protein sequence
MQQIRFCTAA LAACVSFFTF TAPATAGGAQ RPPEAAIKAE NARWANAFAR GDYEEIGRLY 
TDDGTLLPPG GDKVIGSRAI AEYFTKGYAG TKPGTVSFSH YEFYGDDRMV TEVSDAEVRD
HDGKLKIRAK QILVFVKQAG EWKLHRDMWN DYPPVKTADH