| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5950 |
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| Symbol | |
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| ID | 6182394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 500275 |
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| End bp | 501150 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689080 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001815939 |
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| Protein GI | 172065227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.392121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTG ATGCCGCGAC GCGCGCGAGC ATCGGACGCT CGGCGCCTGC CCAGTCATAC
CTGTTCGTGC CGGGCAACAA GCCCGAGCGG TTCGGCAAGG CGCTCGCAAG CGGCGCCGAC
GCGGTCATCA TCGATCTAGA AGATGCCGTC GAACCGGACG CGAAAACCGC TGCGCGCGAT
GCGATCGCGC AGTGGGTTTC GCCCGAGCAT CCGGTGCTCG TGCGGATCAA TGCGCGGAAC
ACGCCGTGGT TCGAGGCCGA CGCCGCACTT GGCGCGTTGA AGGGCGTCGC GGGTATCGTG
TTGCCGAAGG CCGCGCGGGC GGACGATGTG TGCGCGGCCA TTGCGCTTGC ACGCCGGCGC
GTGCCCATCT ATCCGTTGAT CGAAAGCGCG CACGGCATGT GGAACGCGCT CGACGTCGCG
AAAGCGCCGT ACGTCGAGCG GCTGATGTTC GGCACGCTCG ATTTCATCGC GGACATGGGC
ATGTCGGACG ATGGCGTTTC GCTCAATCAC TTTCGGTCGC AACTGACGTT GATTTCGCGG
GTGGCCGGAA TCGAGTCGCC GGTCGACGGC GTGACGCCGG ACATTCACGA TGGGGAGCGG
ATCACGCGTG ACGCGCTCAA CGGGAAGCAA CTGGGATTCG GCGCGAAGCT CTGCATTCAC
CCGAAACAGA TCGCATTCGT GCACCAGTGC TTTCGGCCGA GCGAGGATGA GGTGCGCTGG
GCGCGGCAGG TGCTCGATGC GATGCGCGAG TCGAATGGCG GCGTGGTGAC GGTCGACGGG
AAGATGATCG ATCGGCCCGT GTTGCTGCGT GCGATGCGAA TCGACGAGCT GGCCTCATCC
GCCGGCGCGG CAGCGGAAGG GGCGGCTCGC GCATGA
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| Protein sequence | MPSDAATRAS IGRSAPAQSY LFVPGNKPER FGKALASGAD AVIIDLEDAV EPDAKTAARD
AIAQWVSPEH PVLVRINARN TPWFEADAAL GALKGVAGIV LPKAARADDV CAAIALARRR
VPIYPLIESA HGMWNALDVA KAPYVERLMF GTLDFIADMG MSDDGVSLNH FRSQLTLISR
VAGIESPVDG VTPDIHDGER ITRDALNGKQ LGFGAKLCIH PKQIAFVHQC FRPSEDEVRW
ARQVLDAMRE SNGGVVTVDG KMIDRPVLLR AMRIDELASS AGAAAEGAAR A
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