Gene BamMC406_5950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5950 
Symbol 
ID6182394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp500275 
End bp501150 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID641689080 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001815939 
Protein GI172065227 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.392121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTG ATGCCGCGAC GCGCGCGAGC ATCGGACGCT CGGCGCCTGC CCAGTCATAC 
CTGTTCGTGC CGGGCAACAA GCCCGAGCGG TTCGGCAAGG CGCTCGCAAG CGGCGCCGAC
GCGGTCATCA TCGATCTAGA AGATGCCGTC GAACCGGACG CGAAAACCGC TGCGCGCGAT
GCGATCGCGC AGTGGGTTTC GCCCGAGCAT CCGGTGCTCG TGCGGATCAA TGCGCGGAAC
ACGCCGTGGT TCGAGGCCGA CGCCGCACTT GGCGCGTTGA AGGGCGTCGC GGGTATCGTG
TTGCCGAAGG CCGCGCGGGC GGACGATGTG TGCGCGGCCA TTGCGCTTGC ACGCCGGCGC
GTGCCCATCT ATCCGTTGAT CGAAAGCGCG CACGGCATGT GGAACGCGCT CGACGTCGCG
AAAGCGCCGT ACGTCGAGCG GCTGATGTTC GGCACGCTCG ATTTCATCGC GGACATGGGC
ATGTCGGACG ATGGCGTTTC GCTCAATCAC TTTCGGTCGC AACTGACGTT GATTTCGCGG
GTGGCCGGAA TCGAGTCGCC GGTCGACGGC GTGACGCCGG ACATTCACGA TGGGGAGCGG
ATCACGCGTG ACGCGCTCAA CGGGAAGCAA CTGGGATTCG GCGCGAAGCT CTGCATTCAC
CCGAAACAGA TCGCATTCGT GCACCAGTGC TTTCGGCCGA GCGAGGATGA GGTGCGCTGG
GCGCGGCAGG TGCTCGATGC GATGCGCGAG TCGAATGGCG GCGTGGTGAC GGTCGACGGG
AAGATGATCG ATCGGCCCGT GTTGCTGCGT GCGATGCGAA TCGACGAGCT GGCCTCATCC
GCCGGCGCGG CAGCGGAAGG GGCGGCTCGC GCATGA
 
Protein sequence
MPSDAATRAS IGRSAPAQSY LFVPGNKPER FGKALASGAD AVIIDLEDAV EPDAKTAARD 
AIAQWVSPEH PVLVRINARN TPWFEADAAL GALKGVAGIV LPKAARADDV CAAIALARRR
VPIYPLIESA HGMWNALDVA KAPYVERLMF GTLDFIADMG MSDDGVSLNH FRSQLTLISR
VAGIESPVDG VTPDIHDGER ITRDALNGKQ LGFGAKLCIH PKQIAFVHQC FRPSEDEVRW
ARQVLDAMRE SNGGVVTVDG KMIDRPVLLR AMRIDELASS AGAAAEGAAR A