| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5945 |
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| Symbol | |
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| ID | 6182192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 491025 |
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| End bp | 497015 |
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| Gene Length | 5991 bp |
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| Protein Length | 1996 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689076 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001815935 |
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| Protein GI | 172065223 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCACG TGCGCCGCGT CTGCGGGCAT CCGCCGCAGC GTTCCGGCAC CGTGATTCCG
GCTAACTCAT TCAGACGGGC AGGCAAATTG TCATCCAGCA ATCTGATCCG CATTCGCGGA
GCACGTCAGC ACAACCTCAA GAACCTCGAT CTCGATCTGC GCACCGGCGA AATGACGGTC
GTCACCGGCC CGTCGGGCTC CGGCAAGTCG AGCCTCGTAT TCGACACGCT GTACGCGGAA
GGCCAGCGGC GCTACGTCGA GACGTTCAGC GCATATGCGC GGCAGTTCCT CGACCGGATG
GACCGCCCGC AGGTCGAGCG CGTCGACGGC GTGCCGCCCG CGATCGCGAT CGACCAGACC
AACCCGGTCC GCAGTTCGCG CTCGACGGTC GGCACGATGA CCGAGCTCAA CGATCACCTG
AAGCTGCTGT ACGCGCGGGC GGCCGAGCTG TTCGACCGCC AGACCGCGCG GCAGGTGCGG
CATGACACGC CCGAGACGAT CTACGCGGAA CTCGTCGAGC GCACGCGCGC CGACGATCCG
CGCGTCGTCG TCACGTTCCC GGTCGAGCTG CCGGAAAGCG CGTCCGAGGA CGAAGTCGCG
CAGTGGCTGT CCGCGAGCGG CTACACGCGC GTGCAGGCGC AACGCGAAGT CGCGTCGCCC
ACCGGCCCGC GCAAGCTGCT CGACGTGGTG GCCGACCGCT TCCGCGTGCA GCAGGCCGAC
AAGGTGCGCG TGGTGGAGGC GATCGAGGCG TCGCTGAAGC GCGGCGGCGG CCGCGTAAAC
GTCTACGTGC TGGCGCCGGA ATCCGACAAC GCGCTTGCCC CAACCGTCGA GCCGCAGGTG
TGGCGCTTCT CCACCGGGCT GCACGATCCG GATAGCGACC TGCGCTACGC GGAGCCGCAG
GCGGCGCTGT TCTCGTTCAA CTCGGCCTAC GGCGCGTGCG AGACCTGCCG CGGCTTCGGC
CGCGTGATCG GCGTCGATCT CGGCCTCGTG ATCCCCGACG CGCGCAAGAC GCTGCGCGGC
GGCGCGATCA AGCCGATGCA GACGCCCGCG TGGAAGGAAT GCCAGGACGA CCTGATGCGC
TACGCGGCGA AAGCCGGCAT CCCGCGCGAC ACGGCGTGGT CCGACCTGAC GGACGCCGAG
CGCGCATGGG TGATCGACGG CTCGCCGGAC TGGAACGGCA AGTGGCAGAG CCAGTGGTAC
GGCGTCAAAC GCTTCTTCGG CTATCTCGAG TCGAAGGCGT ACAAGATGCA TATCCGCGTG
CTGCTGTCGA AGTACCGCAG CTACACGCCG TGCGACGTGT GCGGCGGCGC GCGCCTGAAG
ACCGAATCGC TGCAGTGGCG GCTCGGCTCG AAGGCGAACG CCGACGCGGT GCTCGCGCCC
GCCGATCGCT TCCTGCCGCG CGGCGTCGAC TGGACGCGCG CGCAGCTGGA GGCGCTGCCG
GGCCTGACGG TGCACGATCT GATGCTGCTG CCGATCGAGC GCATCCGCCG CTTCTTCGAC
GACGTGAGCC TGCCGAGCGC GCTGCTCGAC GACGCGCTGA AGCTGCTGCT CGCCGAGGTG
CGCACGCGCC TGAAATACCT GTGCGACGTC GGGCTCGGCT ACCTGACGCT CGACCGGCAG
AGCCGCACGC TGTCCGGCGG CGAGGTCCAG CGGATCAACC TGACCACGGC GCTCGGCACG
TCGCTCACGA AAACGCTGTT CGTGCTCGAC GAGCCGAGCA TCGGGCTGCA TCCGCGCGAC
CTCACGCGTA TCGTCGAGGC GATGCAGCGG CTGCGCGACG CGGGCAATAC GCTGGTCGTC
GTCGAGCACG ATCCGTCGGT GATGCTCGCG GCCGACCGGC TGATCGACAT GGGCCCGGGG
CCCGGCGAGC GCGGCGGCAC GATCGTCTAC GACGGCACGC CGGGCGACAT CCGTTCCGCG
CACACGCTGA CGGGCGAGTA TCTCGGCGGC CGCAAGCACG TCGCGCATGC GTCGAACTGG
GCGCGCCGTC CGGTGGACGC GAACACGCCG CGCATCGTGC TCGAAGGCGC GACCGAGCAC
AACCTGCGCG ACGTGACGGT CGAGATTCCG CTGCAGCGGC TCGTGTGCGT GACGGGCGTA
TCGGGTTCCG GCAAGTCGAC GCTGCTGCAG GACGTGCTTT ATCCGGCGAT GGCGCGCCAC
CACGGCAAGG CGACCGAGTC GCCGGGCGCG TTCCGCGAAC TCACGGGCGC CGATCAGGTC
GGCGACGTCG TGTTCGTCGA TCAGTCGCCG ATCGGCAAGA CCACGCGGTC GAACCCGGCC
AGCTATGTCG GCGCGTTCGA CGAGATCCGC AAGCTGTTCG CGAAGGCGCC GCTCGCGCTG
CAACGCGGCT ACGGCGCGGG CACGTTCAGC TTCAACTCGG GCGACGGCCG TTGCCCGACC
TGCGGCGGCT CGGGCTTCGA GCACATCGAG ATGCAGTTCC TGAGCGACGT CTACCTGCGT
TGCCCGGACT GCGACGGCAG CCGCTACCGC GCCGAGATTC TCGAAGTGCG CATCGAGCGC
GACGGCCGCG CGCTGAACAT CGCCGACGTG CTCGACCTGA CCGTCAGCGA GGCAACTGCG
TTCTTTGCGA CCGACGCCGA GGTGCTGCGC GTGCTGCAGC CGATCGTCGA CGTCGGTCTC
GAATACGTGA AACTCGGCCA GCCGGTGCCG ACGTTGTCCG GCGGCGAAGC GCAGCGGTTG
AAGCTGGCCG GCTTCCTCGC CGAATCGGCG GCGGCCGCCG GCGGGCGCCG CGTCGCCAGC
GAGGAGGCGC GCGTCGCGCG GGCGAAGCTG TTCATGTTCG ACGAGCCGAC CACCGGGCTG
CACTTCGACG ACATCGCGAA GCTGATGCAG GCGTTCGGCA AGCTGCTCGC GGCCGGCCAT
TCGCTGATCG TGATCGAGCA CAACCTCGAC GTGATCCGCG CGGCCGACTG GCTGATCGAT
CTCGGCCCTG AAGGCGGCGA TGGCGGCGGC CGCGTGCTGT GCGCGGGCAC GCCCGACGAC
GTGAAGGCCT GCGCGGAATC GCATACCGGC GTCGCGCTGC TGCAGTACGA CCGCGCGATG
GACGGCGAAA CGGCGCTGGC CGACGAAGGG GTGCCGCTGC AGGCCGTGCT GAACGCCGCC
CGGGAGCGGC GCGCGATCGA GGGCGAGGAC GTCGTACGGA TCGTCAACGC ACGCGAGCAC
AACCTGAAGG CGCTCGACGT CGATATCCCG CACGGCAAAT TCAACGTGAT CACCGGCGTG
TCGGGTTCCG GCAAGTCGAC GCTCGCGTTC GACATCCTGT TCCACGAAGG CCAGCGCCGC
TACCTCGAAT CGCTGAACGC GTATGCGCGC TCGATCGTGC AGCCGGCCGG GCGGCCGGAA
GTCGACGCGG TGTACGGCAT TCCGCCGACG GTCGCGATCG AGCAGCGGCT GTCGCGCGGC
GGCCGCAAGA GCACGGTCGC GACCACGTCC GAAGTCTGGC ACTTCCTGCG GCTGCTGTAT
GTGAAGCTCG GCCTCCAGCA TTGCATCCAC GACGGCACGC CGGTCACGTC GCAAACCGTC
GAGTCGATCG CCGCGCAGCT GCTGCGCGAC CATCGCGGCG AGCACGTCGG GCTGCTCGCG
CCGCTCGTCG TCAACCGCAA GGGCGTGTAT ACCGATCTCG CGAAATGGGC GAAGGCGCGT
GGCAGCACGC ATCTGCGCGT GGACGGCGAG TTCGTGCCGG TCGATCCGTG GCCGAAGCTC
GATCGCTTCC GCGAGCACAC GATCGAGCTG CCGGTGGCCG ATATCGTCGT GTCGCCGGAC
GAAGAAGTCG AATTGCGGCG GGTGCTCGAC GAGACACTCG AACTCGGCAA GGGCGTGATG
CACCTGCTCG CGCCGCTCGA CGGGCTGCAC CACGCGGTGC AGAACGGTCA TTCGACCGCG
CGCGTCGGCG AGGTCAAGGT GCTGTCGGTC AAGCGTGCGT GCCCGGTGTG CGGCACGAGC
TATCCGGAAC TCGATCCGCG GATGTTCTCG TACAACAGCA AGCATGGCTG GTGCACGACC
TGCGTCGGCA CGGGCGTCAC GCTCACGCGC GAACAGCGCG CGGCGTACGA CGACACCGTG
CGCGCCGGGG ACGATCGCGG CCGCGAGCAG ACGCTGCCGT CGGACGAGCA GGAACCGGAA
GGCGTCGGCA ACGAGCCGTG CCCCGATTGC GGCGGCACGC GCCTGAACCC GTCCGCACGC
GCGGTCACGT TCGACGCGCA TCCGATCGTC GAGGTCGCGC AGTGGACGGT GTCCGATACG
CGCCGCTGGA TCGACGCGCT GGAACTGACC GGCCGCGACG CGCAGATCGC GCGCGACATC
GTCAGCGAGA TCGGCAGCCG CCTCGCGTTT CTCAAGGAGG TCGGGCTCGG CTACCTGAGC
CTCGATCGCG CGGCGCCGAG CCTGTCGGGC GGCGAAGCGC AGCGCATCCG GCTCGCCGCG
CAGCTCGGCA GCAACCTGCA GGGCGTGTGC TACGTGCTCG ACGAGCCGAC GATCGGCCTG
CATCCGCGCG ACAACCGGAT CCTGCTGGAC GCGCTGCGCA AGCTCGGCGA CAAGGGCAAC
ACGCTCGTCG TCGTCGAGCA TGACGAGGAC ACGATTCGCC GCGCCGATCA CATCATCGAC
GTCGGCCCGG GCGCCGGCAA GCGCGGCGGC ACGCTGGTCG CCGAGGGCGC GGTCACCGAT
CTGGCCGCGC AGCCGGATTC GGTGACGGGG CGCCTGCTCG CGCAGCCGAT GACGCATCCG
CTGCAACCGC GCCGCGCGGT GAGCCTGGCG GGCAAGAAGG GCGCACCGGT GGTGCCGGAG
GCCTGGCTGA CCGTGCATGG CGCGACGCTG CACAACCTGC GCGACGTCAC GGTCGGCATT
CCGCTCGCGC GGCTCGTCGC GGTGACGGGC GTGAGCGGCT CCGGCAAGTC GACGCTCGCG
CGCGACGTGC TGATGACGAA CCTGCTCGAC GCGGTCGGCC GCTCGGTGCT GTCGTCGCCG
GCCACGCGGC GCGCGCGCAA GGCCGCGCAG CAGGACGCGC CGGCCGCCAA CCGCCGCTCG
AGCGTGCTCG CGCGCAGCGC GCCGCGGCCG TCGCTGAACG TCACGCATGC GTGGCAGGGC
TGCGCGTCGC TGAGCGGCTG GGAGCGGATC GACCGCGTGC TCGAAGTCGA CCAGACGCCG
ATCGGCAAGA CGCCGCGCTC GTGTCCGGCC ACCTACATCG GCGTGTGGGA CACGATCCGC
AAGCTGTTCG CCGATACGCT GGAGGCGCGT GCGCGCGGCT ATACGGCGTC GCGTTTCTCG
TTCAATACCG GCGACGGGCG CTGCCCGGCC TGCGAAGGGC AGGGCGTGCG CACGATCGGG
ATGAGCTTCC TGCCCGACGT GAAGGTGCCG TGCGACGTGT GCCACGGGCA GCGCTTCAAT
CCGGAGACGC TCGCGGTCAC GTGGCGCGGC CGGAACATCG GCGACGTGCT GACGATGGAG
ATCGACGAAG CGGTGGAGTT CTTCGCACCG ATTTCGAACA TCGCGCATCC GCTGCAGCTG
ATGAAGGACG TCGGCCTCGG CTATCTGACG CTCGGCCAGC CGTCGCCAAC ATTGTCGGGC
GGCGAGGCGC AGCGCATCAA GCTCGTCACC GAGCTCACGA AGGTGCGCGA CGACATCACG
CGACGCGGCC AGAAGGCGCC GCACACGCTG TACGTGCTCG ACGAGCCGAC GGTCGGGCTG
CACATGGCCG ACGTCGCGAA GCTGATCCGC GTGCTGCACC GGCTGGTCGA CGGCGGGCAT
AGCGTCGTCG TGATCGAGCA CGATCTCGAC GTGATCGCGG AAGCCGACTG GATCATCGAT
CTCGGTCCGG AAGGCGGCGT GGGCGGTGGC ACGATCGTCG CGGCGGCGCC GCCGGAAGGG
CTCGTGCAGG TGAGCGCGAG CCACACGGGG CAGGCGTTGA AGCCGGTGCT GGCGCGAACG
GCCGCGGATC GCGGCGAAGC TGAGCGGCAG GACGAAGCGC GGGTCGGTTG A
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| Protein sequence | MRHVRRVCGH PPQRSGTVIP ANSFRRAGKL SSSNLIRIRG ARQHNLKNLD LDLRTGEMTV
VTGPSGSGKS SLVFDTLYAE GQRRYVETFS AYARQFLDRM DRPQVERVDG VPPAIAIDQT
NPVRSSRSTV GTMTELNDHL KLLYARAAEL FDRQTARQVR HDTPETIYAE LVERTRADDP
RVVVTFPVEL PESASEDEVA QWLSASGYTR VQAQREVASP TGPRKLLDVV ADRFRVQQAD
KVRVVEAIEA SLKRGGGRVN VYVLAPESDN ALAPTVEPQV WRFSTGLHDP DSDLRYAEPQ
AALFSFNSAY GACETCRGFG RVIGVDLGLV IPDARKTLRG GAIKPMQTPA WKECQDDLMR
YAAKAGIPRD TAWSDLTDAE RAWVIDGSPD WNGKWQSQWY GVKRFFGYLE SKAYKMHIRV
LLSKYRSYTP CDVCGGARLK TESLQWRLGS KANADAVLAP ADRFLPRGVD WTRAQLEALP
GLTVHDLMLL PIERIRRFFD DVSLPSALLD DALKLLLAEV RTRLKYLCDV GLGYLTLDRQ
SRTLSGGEVQ RINLTTALGT SLTKTLFVLD EPSIGLHPRD LTRIVEAMQR LRDAGNTLVV
VEHDPSVMLA ADRLIDMGPG PGERGGTIVY DGTPGDIRSA HTLTGEYLGG RKHVAHASNW
ARRPVDANTP RIVLEGATEH NLRDVTVEIP LQRLVCVTGV SGSGKSTLLQ DVLYPAMARH
HGKATESPGA FRELTGADQV GDVVFVDQSP IGKTTRSNPA SYVGAFDEIR KLFAKAPLAL
QRGYGAGTFS FNSGDGRCPT CGGSGFEHIE MQFLSDVYLR CPDCDGSRYR AEILEVRIER
DGRALNIADV LDLTVSEATA FFATDAEVLR VLQPIVDVGL EYVKLGQPVP TLSGGEAQRL
KLAGFLAESA AAAGGRRVAS EEARVARAKL FMFDEPTTGL HFDDIAKLMQ AFGKLLAAGH
SLIVIEHNLD VIRAADWLID LGPEGGDGGG RVLCAGTPDD VKACAESHTG VALLQYDRAM
DGETALADEG VPLQAVLNAA RERRAIEGED VVRIVNAREH NLKALDVDIP HGKFNVITGV
SGSGKSTLAF DILFHEGQRR YLESLNAYAR SIVQPAGRPE VDAVYGIPPT VAIEQRLSRG
GRKSTVATTS EVWHFLRLLY VKLGLQHCIH DGTPVTSQTV ESIAAQLLRD HRGEHVGLLA
PLVVNRKGVY TDLAKWAKAR GSTHLRVDGE FVPVDPWPKL DRFREHTIEL PVADIVVSPD
EEVELRRVLD ETLELGKGVM HLLAPLDGLH HAVQNGHSTA RVGEVKVLSV KRACPVCGTS
YPELDPRMFS YNSKHGWCTT CVGTGVTLTR EQRAAYDDTV RAGDDRGREQ TLPSDEQEPE
GVGNEPCPDC GGTRLNPSAR AVTFDAHPIV EVAQWTVSDT RRWIDALELT GRDAQIARDI
VSEIGSRLAF LKEVGLGYLS LDRAAPSLSG GEAQRIRLAA QLGSNLQGVC YVLDEPTIGL
HPRDNRILLD ALRKLGDKGN TLVVVEHDED TIRRADHIID VGPGAGKRGG TLVAEGAVTD
LAAQPDSVTG RLLAQPMTHP LQPRRAVSLA GKKGAPVVPE AWLTVHGATL HNLRDVTVGI
PLARLVAVTG VSGSGKSTLA RDVLMTNLLD AVGRSVLSSP ATRRARKAAQ QDAPAANRRS
SVLARSAPRP SLNVTHAWQG CASLSGWERI DRVLEVDQTP IGKTPRSCPA TYIGVWDTIR
KLFADTLEAR ARGYTASRFS FNTGDGRCPA CEGQGVRTIG MSFLPDVKVP CDVCHGQRFN
PETLAVTWRG RNIGDVLTME IDEAVEFFAP ISNIAHPLQL MKDVGLGYLT LGQPSPTLSG
GEAQRIKLVT ELTKVRDDIT RRGQKAPHTL YVLDEPTVGL HMADVAKLIR VLHRLVDGGH
SVVVIEHDLD VIAEADWIID LGPEGGVGGG TIVAAAPPEG LVQVSASHTG QALKPVLART
AADRGEAERQ DEARVG
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