Gene BamMC406_5939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5939 
Symbol 
ID6182186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp485547 
End bp486269 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID641689070 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001815929 
Protein GI172065217 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC CCACGCTCCC CACCGAGTCT TCCGTCGGCG AATCTGCCGA CATCGCCCCC 
GCCGACGCCG TGCCTGACGG CTGGCGCGGC ATCGTCACCG ACTGGGCGGG CGACCGCGAA
GCCTTCAAGG TGCCGTGGGG CAAGGCGATG ATGTGGATCT TCCTGCTGTC GGACACCTTC
GTCTTCAGCA GCTTCCTGAT CGGCTACATG TCGGTGCGCA TCTCGACCAC GGCGCCGTGG
CCCGATACGT CCAAGGTATT CGGGCTCACG GTGGGCGGCG TGGATGTGCC GTTGCTGCTG
ATCGCGATCA TGACTTTCAT CCTGATCAGC AGCAGCGGCA CGATGGCGAT GGCCGTCAAC
TTCGGTTACC GACGCAACGC CAAACGCGCC GCCTTGCTGT TGCTGGCGAC CGCGCTGCTG
GGCGCGGCCT TCGTGTCGAT GCAGGCGCTC GAATGGACCA AGCTGATCGT CCATGAAGGT
ATCCGGCCAT GGGGCAACCC GCTGGGCGCG GCGCAGTTCG GCGCGTGCTT CTTCACGATC
ACCGGGTTCC ACGGCTTTCA CGTGACCTGC GGCGTGATCT ACCTGCTGCT GATCGCACGC
AAGGTGCTGC AGCCGGGGTT CACCGAGCAC GGCAACTTCC AGATCGTCGA GATTGCCGGG
CTGTACTGGC ACTTCGTCGA CCTGGTGTGG GTGTTCATCT TCGCGTTGTT CTACTTGTGG
TGA
 
Protein sequence
MTVPTLPTES SVGESADIAP ADAVPDGWRG IVTDWAGDRE AFKVPWGKAM MWIFLLSDTF 
VFSSFLIGYM SVRISTTAPW PDTSKVFGLT VGGVDVPLLL IAIMTFILIS SSGTMAMAVN
FGYRRNAKRA ALLLLATALL GAAFVSMQAL EWTKLIVHEG IRPWGNPLGA AQFGACFFTI
TGFHGFHVTC GVIYLLLIAR KVLQPGFTEH GNFQIVEIAG LYWHFVDLVW VFIFALFYLW