| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5937 |
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| Symbol | |
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| ID | 6182184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 483182 |
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| End bp | 484942 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641689068 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001815927 |
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| Protein GI | 172065215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACG CGCATTCCGA TCACGCCCCG CAGAGCTTCT GGACCCGCTA CGTGTGGAGC
CAGGACCACA AGGTCATCGC CGTGCAGTAC GCGCTCACGG CCATCGCCAT CGGTCTCGTC
GGCCTGGTGC TGTCGAACCT GATGCGGCTG CAGCTCGGCT TCCCGGGCAA GTTCGCGTTC
ATCGACGCGA ACCACTACTA CCAGTTCGTC ACGATGCACG GGATGATCAT GGTGATCTAC
CTGCTGACGG CGCTGTTCCT CGGCGGCTTC GGCAACTACC TGATCCCGCT GATGCTGGGC
GCGCGCGACA TGGTGTTCCC GTTCCTCAAC ATGCTGAGCT ACTGGGTCTA TCTGCTGGCC
GTGCTGGTGC TGACCGCGAG CTTCTTCGTG CCGGGCGGAC CGACCGGCGC GGGCTGGACG
CTGTATCCGC CGCAGGCCAT CCTGCCAGGC ACGCCGGGCG TCGAATGGGG CATCGTGCTG
ATGCTGGTGT CGCTCGCGAT CTTCATCGTC GCGGCGACGA TGGGCGGCCT GAACTACGTC
ACCACCACGC TGCAGGCGCG CACGCGCGGC ATGACGCTGA TGCGCATGCC GCTCACGGTG
TGGGGCATCT TCACCGCAAC GATCATGGCG CTGCTGGCGT TTCCGGCGCT GTTCGTGTCG
GCGGTGATGA TGCTGTTCGA CAAGACGCTC GGCACCAGCT TCTTCGTGCC GGCCGTGGTG
TCGATGGGGC AAACGCTCAA CCATGCCGGC GGCAGCCCGC TGCTGTTCCA GCACCTGTTC
TGGTTCTTCG GGCATCCGGA GGTCTACATC GTCGCGCTGC CGGCGTTCGG CATCGCGTCG
GACCTCATCA GCACGCACGC GCGCAAGAGC ATCTTCGGCT ACCGGATGAT GGTGTGGGCG
ATCGTCATGA TCGGCGCGCT GAGCTTCGTG GTCTGGGCTC ACCACATGTT CATCGCCGGC
ATGAATCCGT ACTTCGGCTT CTTCTTCGCC ACCACGACGC TGATCATCGC CGTGCCAACG
GCGCTGAAGG TCTACAACTG GGTGCTGACG CTATGGCGCG GCGATATCCA CCTGACCGTG
CCGATGCTGT TCGCGATCGG CTTCATCAGC ACCTTCGTGC TCGGCGGGTT GACGGGGCTG
TTCCTCGGCA ACGTGAGCGT GGACATTCCG CTGTCGAACA CGTACTTCGT GGTCGCGCAC
TTCCATATGG TGATGGCCGT GTCGCCGATC CTGGTGGTGT TCGGCGGCCT CTACCACTGG
TATCCGCTGG TGACGGGCCG CATGTTGAAC GACACGCTCG GGCGCCTGCA CTTCTGGTTC
ACCTTCGTCG GCACCTATGC GATCTACTTC CCGATGCACT ATCTCGGCGT CCTCGGCATG
CCGCGACGCT ATTACGCGTA TGAAGGCTAC AGCTTCATTC CGCATTCGGC GCAGACGCTC
AATGCGTTCA TCACCGTCGT TGCGCTGATC GTCGGCGTGG CGCAGCTGCT GTTCCTGTTC
AACCTCGCGT GGAGCCTCAA GCACGGCAAG CGTGCCGACG GCAACCCGTG GCGGGCCACC
ACGCTCGAAT GGCAGACGCC GCAATCGCCG CCCGCGCACG GCAACTGGGG CGCGGCGCTG
CCGGTCGTCT ATCGCTGGGC ATACGAATAC AGTCCCGCAG GGCAGGCGGA AGATTTCGTC
CCGCAGAACC GGCCGCCCGC GACGGCGCCC GAGCCCGCGC CGGCCCGGCC GACGCTTCAC
TCCGGCGAGG CACACGAATG A
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| Protein sequence | MTYAHSDHAP QSFWTRYVWS QDHKVIAVQY ALTAIAIGLV GLVLSNLMRL QLGFPGKFAF
IDANHYYQFV TMHGMIMVIY LLTALFLGGF GNYLIPLMLG ARDMVFPFLN MLSYWVYLLA
VLVLTASFFV PGGPTGAGWT LYPPQAILPG TPGVEWGIVL MLVSLAIFIV AATMGGLNYV
TTTLQARTRG MTLMRMPLTV WGIFTATIMA LLAFPALFVS AVMMLFDKTL GTSFFVPAVV
SMGQTLNHAG GSPLLFQHLF WFFGHPEVYI VALPAFGIAS DLISTHARKS IFGYRMMVWA
IVMIGALSFV VWAHHMFIAG MNPYFGFFFA TTTLIIAVPT ALKVYNWVLT LWRGDIHLTV
PMLFAIGFIS TFVLGGLTGL FLGNVSVDIP LSNTYFVVAH FHMVMAVSPI LVVFGGLYHW
YPLVTGRMLN DTLGRLHFWF TFVGTYAIYF PMHYLGVLGM PRRYYAYEGY SFIPHSAQTL
NAFITVVALI VGVAQLLFLF NLAWSLKHGK RADGNPWRAT TLEWQTPQSP PAHGNWGAAL
PVVYRWAYEY SPAGQAEDFV PQNRPPATAP EPAPARPTLH SGEAHE
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