| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5927 |
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| Symbol | |
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| ID | 6182288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 468738 |
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| End bp | 469826 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689058 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_001815917 |
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| Protein GI | 172065205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0316378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAT TCCTCGCCCG GCTCGCCGAC CCGCGCACGC TGCCGATCGT CGTGACGATC
GTGCTGTTCG CCGCGCTGTT CGGCTTCGGA TCCGTGATGT ACACCGGCTT CTTCTCGATG
CAGGTGTTGA CCGGGCTGCT CGTCGACAAC GCGTTCCTGC TGATCGTCGC GATCGGGATG
ACGTTCGTGA TCGTGTCGGG CGGCATCGAC CTGTCGGTCG GCTCGGTCGT TGCGTTGACA
ACGATCTTCT GCGCGGTCGG CGCCGAGCGG CTGCACTGGC CCGTGTGGGC GATCGTGCCG
CTCGTGCTCG TGTTCGGCGC GCTGTACGGC GCGGCGATGG GTGCACTGAT CCATTACTTC
CGGCTGCAGC CGTTCATCGT CACGCTGGCC GGGATGTTTC TCGCGCGCGG CGCGTGCTTC
CTGATCACGA CGCAGTCGAT CACGATCAAC GAGCCGACGT TCCATGCGCT CGCGGGCATC
AGCGTGCCGA TCGGCGGGGG CACGCTGAGC GCGGGCGCGC TGATCGCGCT CGCGACGCTG
GCCGCGGCAA TCTACGTCGC GCATTTAACA CGCTTCGGCC GCAACGTCTA TGCGATCGGC
GGCAACGAGC GCTCGGCGCT GCTGATGGGG CTGCCGGTCG CGCGCGCCAA GGTCGGCGTG
TATGCGCTGA GCGGCTTCTG TTCGGCGCTC GGCGGCGTGG TGTTCACGCT GTACGTGCTG
TCCGGCTACG GGCTGCAGGC GCAGGGGATG GAGCTCGACG CGATCGCCGC GACGGTGATC
GGCGGCACGC TGCTCACGGG CGGCGTGGGC TACGTGATCG GGTCGGTGTT CGGCGTCGGC
ATCCTCGGCA CGATCCAGGT GCTGATCACG TTCGACGGCA CGCTGAGTTC GTGGTGGACG
CGGATCGTGA TCGGCGCGCT GCTGTGCGTG TTCTGCCTGC TGCAGCGGGT GATCGAGCGG
CATGCGACGC GGCGGCGTAC CGGCGGCACC GGGCTCGATC CGAAACGCCG CAAGCGCGAG
GCCGCGCAAG TCAGGCCCGC GGCGGCGGGC GACGATGCGG CGCTGGTGTC GACGATGCGG
CGGTTGTAA
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| Protein sequence | MNRFLARLAD PRTLPIVVTI VLFAALFGFG SVMYTGFFSM QVLTGLLVDN AFLLIVAIGM
TFVIVSGGID LSVGSVVALT TIFCAVGAER LHWPVWAIVP LVLVFGALYG AAMGALIHYF
RLQPFIVTLA GMFLARGACF LITTQSITIN EPTFHALAGI SVPIGGGTLS AGALIALATL
AAAIYVAHLT RFGRNVYAIG GNERSALLMG LPVARAKVGV YALSGFCSAL GGVVFTLYVL
SGYGLQAQGM ELDAIAATVI GGTLLTGGVG YVIGSVFGVG ILGTIQVLIT FDGTLSSWWT
RIVIGALLCV FCLLQRVIER HATRRRTGGT GLDPKRRKRE AAQVRPAAAG DDAALVSTMR
RL
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