Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5924 |
Symbol | |
ID | 6182285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 465161 |
End bp | 466123 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689055 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001815914 |
Protein GI | 172065202 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.39101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA TCAGGAAGCT GGCGGCCGGC GCAATCGTCG CCGCGGCGAC GGTGCTGGCC ACCGGCGCGC ACGCGCAGCA AAAACCGATC ACGCTCGGGT TCTCGCAGGT CGGCGCGGAG AGCGCATGGC GCACGGCGAA CACCGTATCG GTGAAGAGCG CGGCGAAGGA CGCCGGCATC AACCTGAAAT TCTCGGACGC GCAGCAGAAG CAGGAGAACC AGATCCGCGC GATCCGCTCG TTCATCGCGC AGAAGGTCGA CGTGATCGCG TTCTCGCCGG TCGTCGAGTC GGGCTGGGAG CCGGTGCTGA CCGAAGCGAA GGCCGCGCAT ATCCCGGTGA TCCTGACCGA TCGCGGCGTC GACGTGAAGG ATCCGTCGCT GTACGTGACG ATGATCGGCT CCGACTTCCT CGAGGAAGGG CGGCGCGCCG GCCACTGGAT GGAAGAGCGC TACAAGAACG ACGCGGGCCC GATCAACATC GTCGAGCTGC AGGGCACGGT CGGCTCCGCG CCGGCCAACG ATCGCCGCGC GGGCCTGCTG GAAGTGATCA AGAGCAATCC GAAGTTCAAG GTGATCGCGT CGCAAAGCGG CGACTTCACG CTCGCCGGCG GCAAGCAGGT GATGGAAGCG TTCGCGAAGA CCTACGGCAA GCAGATCAAC GTCGTCTACG CGCACAACGA CGACATGGCG CTCGGCGCGA TCCAGGCGAT GGAAGAAGCC GGCATCAAGC CCGGCAAGGA CGTGAGCGTG GTGTCGTTCG ATGCGACCAA GGGCGGCTTC CAGGCGATGG TCGCGGGCAA GATCAACGTC GACGTCGAAT GCAGCCCGCT GCTCGGCCCG CAGCTGATGA CGGCGGTGAA GGACGTGGTC GCCGGCAAGC AGTTGCCGAA GCGCATCGTC ACGAATGAGA CGGTGTTCCC GATGAACGTC GCGGCGCAGG TGCTGCCGAC CCGCAAGTAC TGA
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Protein sequence | MTFIRKLAAG AIVAAATVLA TGAHAQQKPI TLGFSQVGAE SAWRTANTVS VKSAAKDAGI NLKFSDAQQK QENQIRAIRS FIAQKVDVIA FSPVVESGWE PVLTEAKAAH IPVILTDRGV DVKDPSLYVT MIGSDFLEEG RRAGHWMEER YKNDAGPINI VELQGTVGSA PANDRRAGLL EVIKSNPKFK VIASQSGDFT LAGGKQVMEA FAKTYGKQIN VVYAHNDDMA LGAIQAMEEA GIKPGKDVSV VSFDATKGGF QAMVAGKINV DVECSPLLGP QLMTAVKDVV AGKQLPKRIV TNETVFPMNV AAQVLPTRKY
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