Gene BamMC406_5920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5920 
Symbol 
ID6182281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp461662 
End bp462546 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID641689051 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001815910 
Protein GI172065198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.366675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.485189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAG TGACGAAAGC CGTATTTCCG GTTGCCGGTC TCGGCACACG ATTTCTGCCC 
GCGACCAAAG CCAGCCCGAA AGAAATGCTG CCGGTCGTGG ACAAGCCGCT GATTCAATAT
GCGGTCGAGG AGGCGATCGA CGCCGGCATC ACCGAAATGA TTTTCGTGAC CGGCCGCAGC
AAGCGCGCGA TCGAGGATCA CTTCGACAAG TCCTACGAGA TCGAAGCGGA GCTCGAAGCA
CGCGGCAAGG AGAAGCTGCT GTCGCTGGTT CGCAGCATCA AGCCGAGCCA TGTCGACTGC
TTCTACGTAC GCCAGGCCGA AGCACTGGGG CTCGGCCATG CCGTGCTGTG CGCGGAGAAG
CTGGTCGGTA ACCAGCCGTT CGCGGTGATC CTCGCCGACG ATCTGCTCGA CGGTCCGACG
CCCGTGCTGC GCCAGATGAT CGACGTGTTC GATCACTATC ACGCGTCGGT GATCGGCGTG
GAGGAAATCG CGCCCGAGGC ATCGAAGTCG TACGGTGTGA TCGCCGGCAA GCGCTGGGAG
GACAATTTGT TCAAGTTGTC GGGAATCGTC GAGAAGCCGG AGCCGGCGAA GGCGCCGTCG
AATTTCGGCG TGGTGGGCCG TTACGTGCTG AAGCCGAAGG TGTTCGAGCA TCTGCGCGCG
CTGCGGCTCG GCGCCGGCGG CGAACTGCAG TTGACGGACG CGATCCAGTC GCTGCTCGCT
GACGAGCAGG TGCTCGCCCA TCGCTACGAA GGCACGCGCT TCGATTGCGG CAGCAAGCTC
GGGTATTTGA AGGCGACGGT CGAGTTCGCG CTGCGGCATC CGGAAGTGGC CGCGGATTTC
GAAAGCTATC TCGCCACGCG CATGTCCGCG CTGCTGGTCG CCTGA
 
Protein sequence
MLKVTKAVFP VAGLGTRFLP ATKASPKEML PVVDKPLIQY AVEEAIDAGI TEMIFVTGRS 
KRAIEDHFDK SYEIEAELEA RGKEKLLSLV RSIKPSHVDC FYVRQAEALG LGHAVLCAEK
LVGNQPFAVI LADDLLDGPT PVLRQMIDVF DHYHASVIGV EEIAPEASKS YGVIAGKRWE
DNLFKLSGIV EKPEPAKAPS NFGVVGRYVL KPKVFEHLRA LRLGAGGELQ LTDAIQSLLA
DEQVLAHRYE GTRFDCGSKL GYLKATVEFA LRHPEVAADF ESYLATRMSA LLVA