| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5915 |
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| Symbol | |
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| ID | 6182276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 456615 |
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| End bp | 457418 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689046 |
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| Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001815905 |
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| Protein GI | 172065193 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.406205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.880078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGT TCAATGACGG GCGGACGGTG CACGTCGTGA TTCCGGCCCG GTACGGATCG
ACCCGACTGC CGGGCAAGCC GCTCGTCGAT CTGGAGGGCG AGCCGATGAT CGTCCGCGTG
CATGCGCGCG TGCGCCGCGC GCTGCCGGAG GCCGACATCG TCGTCGCGAT CGACGATGCT
CGCATTGCCG AGGTGCTCGA TGCGCGCGGG ATCCGCTTCG CGATGACCGA TACCGGTCAT
GCGTCCGGCA CCGATCGCGC GGCGGAAGTC GCGCGCGTGT CCGGCTGGCC AGACACCGAC
GCGGTGCTCA ACGTGCAGGG CGACGAACCG CTCGTGCCGA CGGCGCTGCT GCAGGCATTC
GCCGGCTTTT GCGGCGCGAC GGCGGCCCTC GGTGTAGCGA CGGTCGCCTG TCCGATCGGC
GAAGTCGCGC TGCTTGACGA GCCGGCCATC GTCAAGGTCG TCGTCGATCA CCGTGGACGT
GCGCTGTACT TCTCGCGCGC GGCGATTCCG TTCTGCCGCG ACGGACGGCC GGCGGACTCA
GCCGGTTCGA ACGGCCTGTT CCTGCGGCAC ATCGGTCTCT ACGGCTACAC GAACGCGACC
TTGCAGGCGC TGTCACGCGC GGCGCCGTGC GAACTCGAGC AGCTGGAGAA GCTCGAGCAG
TTGCGCGCGC TCTGGCTCGG CATGCCGATC GACGTGATGC GCTGGCCCGA TGCGCCGCCT
GCCGGCATCG ATACGCCGGA CGACGTCGCC CGTGTCGTCT CCCTTCTCAA ACGACAAACT
CACGATGCGA CAGAACCATA TTGA
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| Protein sequence | MTSFNDGRTV HVVIPARYGS TRLPGKPLVD LEGEPMIVRV HARVRRALPE ADIVVAIDDA
RIAEVLDARG IRFAMTDTGH ASGTDRAAEV ARVSGWPDTD AVLNVQGDEP LVPTALLQAF
AGFCGATAAL GVATVACPIG EVALLDEPAI VKVVVDHRGR ALYFSRAAIP FCRDGRPADS
AGSNGLFLRH IGLYGYTNAT LQALSRAAPC ELEQLEKLEQ LRALWLGMPI DVMRWPDAPP
AGIDTPDDVA RVVSLLKRQT HDATEPY
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