Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5901 |
Symbol | |
ID | 6182484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 440675 |
End bp | 441799 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641689032 |
Product | pyrroloquinoline quinone biosynthesis protein PqqE |
Protein accession | YP_001815891 |
Protein GI | 172065179 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.630073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACGA CACCCGCACC GACCCGGCCG TCCACGCCGC TGTGGCTGCT GGCCGAACTC ACGTATCGCT GTCCGCTGCA TTGCGCGTTC TGCTACAACC CGGTCGATTT CGCGACGCAC GGCACCGAAC TCGATACCGA CGCATGGCGC ACGGTGATCA GCGATGCGCG CGCGCTCGGC GCCGCGCAGA TCGGCTTTTC CGGCGGCGAG CCGCTGCAGC GCGACGACCT TGAGGTGCTG GTCCAGCATG CGCGATCGCT CGGTTTCTAT ACCAACCTGA TCACGTCGGG CGTGGGCCTG AACGCCACGC GCATCGACCG GCTCAAGGCG GCCGGGCTCG ATCATATCCA GCTGTCGCTG CAGGATTCGA CGCGCGAGCT GAACGATTTC CTGACCAGCA CGCGCACCTT CGACCTCAAG CGCGACGTCG GACGGCTGAT CAAGGCGCAC GGCTATCCGA TGGTGCTGAA CTGCGTGCTG CACCGATACA ACTTGCCGCA CGTCGGCCAG ATCATCGAGA TGGCGCTCGA CCTCGGCGCG GATTTTCTCG AACTCGCGAA TACGCAGTAC TACGGCTGGG CGATGCTGAA TCGCGACCAG CTGATGCCGA CCGCCGAACA GCTGCGCGAA GCCGAGGAAA CGGTCAACCG CTACCGCAAG CTCGTCGGCG AACGATGCAA GATCCTGTTC GTCGTGCCCG ACTACTTCGA GCAGCGGCCG AAGGCCTGCA TGAACGGCTG GGGCTCGGTA TTCCTTGGCG TCGCACCGGA CGGCACCGCG CTGCCGTGCC ACGCCGCGCG CGGGTTGCCC GGCCTCGTGC TGCCGAACGT GCGCGACCGC TCGCTGAAGG AGATCTGGTA CGACAGCGAC GCGTTCAACG CGTTTCGCGG CGACGGCTGG ATGCGCGACC CGTGCCGCAC CTGCGACGAG CGCCATACGG ATCATGGCGG GTGCCGGTGC CAGGCGTACA TGCTGGCGGG CGATCCGGCG GAGGCCGACC CGGTGTGCGC GAAGTCCGCA CATCACGGCC AAGTCGAGCA GGCCGTGCAA TTCGCGCGGC GGGCGGGGCG GCAGGACGAG CGTCCGCTGA TCTTTCGCAG TGTGGCTAAT TCGGTCGGGC GCTGA
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Protein sequence | MDTTPAPTRP STPLWLLAEL TYRCPLHCAF CYNPVDFATH GTELDTDAWR TVISDARALG AAQIGFSGGE PLQRDDLEVL VQHARSLGFY TNLITSGVGL NATRIDRLKA AGLDHIQLSL QDSTRELNDF LTSTRTFDLK RDVGRLIKAH GYPMVLNCVL HRYNLPHVGQ IIEMALDLGA DFLELANTQY YGWAMLNRDQ LMPTAEQLRE AEETVNRYRK LVGERCKILF VVPDYFEQRP KACMNGWGSV FLGVAPDGTA LPCHAARGLP GLVLPNVRDR SLKEIWYDSD AFNAFRGDGW MRDPCRTCDE RHTDHGGCRC QAYMLAGDPA EADPVCAKSA HHGQVEQAVQ FARRAGRQDE RPLIFRSVAN SVGR
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