| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5898 |
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| Symbol | |
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| ID | 6182481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 438750 |
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| End bp | 439673 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689029 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001815888 |
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| Protein GI | 172065176 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.323021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA AGATACTCGG CTCGGGCGCC GGCGGCGGAT TGCCGCAATG GAACTGCAAC
TGCGGCAACT GCCGTCGCGC GCGGGCCGGC ACCGACGGCA TCGTGCCGCG CACCCAATCG
TCGATCGCGG TCAGCGGCGA CGGCGTCGAC TGGGTGCTGG TGAACGCGTC GCCGGACATC
CTCGCGCAAC TGCGTGCCGA TCCCGACCTG CAGCCGGCCC GTGCGATCCG CGACAGCGCG
ATCGTCGCCG TCGTGCTGTG CGACGCACAG ATCGATCACG TGACGGGCTT GCTGATGCTG
CGCGAGCGCA CGTCGCCGTT GCCGCTGTAC GCGAGCGCCC CCGTGCTCGA CGATTTGTCG
ACGGGGCTGC CGCTCGTGCC GCTGCTCGGC CACTACTGCG GCGTCGACGT CCACCCGATC
GCGCCGGGCG AACCGTTCGC GATTCCCGGC GCCGGCGGCA TCCGCTTCAC CGCCGTGCCC
GTCGACAGCA AGCCGCCGCC TTATTCGCCG CGGCGTGCGG CGGCCGTTCC CGGCGACAAC
ATCGCACTCC TGATCGAAGA TACGGCCACG GGCCGCCAGG CATTCTACGC ACCGGGGCTC
GCCGACGTCG ACGACGACGT GCGCGCCGCG ATGCGCGACG CCGATCTCGT GCTGGTGGAC
GGCACGTTCT GGACCGGCAC GGAAATGATC GACCTCGGCC TGTCGTCGAA GCACGCGGCC
GAGATGGGCC ATCTCGCGCA GTGCGGCGAC GCGGCGCAGC CGGGGATGAT CGATCGGCTT
CGGCCATTGC CCGCGCATAC GCGCAAAGTG CTCACGCACA TCAACAACAC GAATCCGATT
CTCGACCCCG GTTCCGCGCA GCGTGCGCAG TTGCGCGAGC ACGGGATCGA GGTCGCCCAC
GACGGCATGC AATTCGAGAT CTGA
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| Protein sequence | MKIKILGSGA GGGLPQWNCN CGNCRRARAG TDGIVPRTQS SIAVSGDGVD WVLVNASPDI
LAQLRADPDL QPARAIRDSA IVAVVLCDAQ IDHVTGLLML RERTSPLPLY ASAPVLDDLS
TGLPLVPLLG HYCGVDVHPI APGEPFAIPG AGGIRFTAVP VDSKPPPYSP RRAAAVPGDN
IALLIEDTAT GRQAFYAPGL ADVDDDVRAA MRDADLVLVD GTFWTGTEMI DLGLSSKHAA
EMGHLAQCGD AAQPGMIDRL RPLPAHTRKV LTHINNTNPI LDPGSAQRAQ LREHGIEVAH
DGMQFEI
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