| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5897 |
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| Symbol | |
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| ID | 6182480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 436309 |
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| End bp | 438318 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689028 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001815887 |
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| Protein GI | 172065175 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.313078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATG ACGTTCATCC GACGGCCAAC GCACGTGCCA CGCATGCGCC CGGCTGGCCG
ACGCCGACGA TCCAGAAGTC CCATGAGCGG TCCGAGACGT TCGGCCTGCA GGCGTCGGCA
CGTCCCGACT ACGACCTGCT GTCCGGCGCT GCGCTGGCGC TCAAGCGCGA GCAGAACCGC
GTGCTGTGCG TGCATGCGAT GCCCGTGATG GAGACGCTGC ACGAGCAGAT CGTCAATACC
CAAAGCATGA TCGTGCTGAC CGATGCGGAG GGGTTGATCC TGCATTCGAT CGGCGACGAC
GATTTCCTGC GGCGCGCGGA ACGCGTCGCG CTGCGCCCCG GCGCGAACTG GGCGGAGAAC
CGTCAGGGCA CCAACGCGAT CGGCACCGCG CTCGCGGAGC TGTGCCCGAT GGTCGTGCAT
GGCGACCAGC ACTTCCTGGC CGCGAATCAT TTCCTGACCT GCTCGAGCGT GCCGATCCTC
GATCCGTACG GCGACGCGAT CGGCGTGCTC GACGTGACGG GCGACCACCG CAGCTATCAC
CAGCACACGA TGGCGCTCGC GAAGATGTCG GTGCAGATGA TCGAGAACCA CCTGTTCACG
ACGACCTTCC AGGAGACGCT GCAGGTGTCG TTCCACGGCC GCCCCGAATT CCTCGGCACC
TTGATGGAAG GGATCGTCGC GTTCACCGCG GACGGCCGTT TCCTGTCGGC TAACCGCAGC
GCGCAGTTCC AGCTCGGGAT GCCGCTCGCC GCGCTGCGCG CGCATACGCT CGCGTCGCTG
TTCGACGTGA CGAGCGCGCA GCTGATCGAC CGGATGCGCG CAAGCACCGA GCCGCACGTG
TCGCTGAACC TCGGCAACGG CGCGGTGGTC TGCGCGCGCG TGCAGTTCCG CCGCGCGATG
CGGGCCGAGG GCAGCCGGCC CGCCGAAGTG CACGACGGCG CCGCGCCGGC CGCGCGGCCG
CCGGCTGCGC AAGGCGCGGC GAACCTGTCG CGGCTCAGCT ATCTCGACAC CGGCGATCCG
CAGGTGGCGG CGGTGATCGC GAAGGTCCGC AAGGTGATCG GCAAGGACAT TCCGGTGCTG
ATCACCGGCG AGACCGGCAC CGGCAAGGAA CTGCTCGCGC AGGCGATCCA CAACGACTCG
CCGCGCCGCG ACGGGCCGTT CGTTGCCGTC AACTGCGCGT CGATTCCGGA GACGCTGATC
GAATCCGAGC TGTTCGGCTA CGAGGAGGGG GCGTTTACCG GCGCGCGCCG CAAGGGCGCG
ACCGGCAAGC TGCTGCAGGC GAACGGCGGC ACGCTGTTTC TCGACGAAAT CGGCGACATG
CCGTATCCGC TGCAGGTGCG GCTGCTGCGC GTGCTGCAGG AGCGCATCGT CAACCCGCTC
GGCTCGACGA AGGCGATCGG TGTCGACATC GCGATCATTT GCGCGACGCA CCGCGACCTG
CGCGACATGA TTGCGCAGAA CCGCTTTCGC GAGGACCTGT ATTACCGGCT CAACGGCCTC
GTCGTGCGCC TGCCGCCGCT GCGCGACCGG ACGGACCTCG CGGTGGTCGT CCAGAAGATG
TTGCAACGGG AAACGCTGTC GGGGCCCGGG CGCCGGCCGT TGAGCGTCGC GCCCGACGTG
ATGGCGCTGT TCGAGCGCTG CGCGTGGCCG GGCAATTTCC GGCAGCTCGC GAACCTGCTG
CGTACGGCGG CCGCGATGGT CGACGACGAC TGCGAGATCC GCTGCGAGCA TTTGCCGGAC
GACTTCTTCG ACGACGTACG GCGCGACGAC GGGCCGGCGG CATCGGGCGC TTGCGCGCCG
CCGCCGCTCG CCGCGCCAGC GCCGGCAGCC GCGTTCGCGG CCTGCGATGC GCGGTTGCAG
GACGTGGCCG CATCCGCGAT CGCGGCCGCA CTCGCGCGCC ATGGCGGCAA CGTGTCGGCC
GCCGCACGCG CGCTAGGCGT GTCGCGCAAC ACGATCTACC GCAAGATGCC AGCCGCCGGG
TCCGAGGCGC TGGAGCCCGA CGAGCGCTGA
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| Protein sequence | MRDDVHPTAN ARATHAPGWP TPTIQKSHER SETFGLQASA RPDYDLLSGA ALALKREQNR
VLCVHAMPVM ETLHEQIVNT QSMIVLTDAE GLILHSIGDD DFLRRAERVA LRPGANWAEN
RQGTNAIGTA LAELCPMVVH GDQHFLAANH FLTCSSVPIL DPYGDAIGVL DVTGDHRSYH
QHTMALAKMS VQMIENHLFT TTFQETLQVS FHGRPEFLGT LMEGIVAFTA DGRFLSANRS
AQFQLGMPLA ALRAHTLASL FDVTSAQLID RMRASTEPHV SLNLGNGAVV CARVQFRRAM
RAEGSRPAEV HDGAAPAARP PAAQGAANLS RLSYLDTGDP QVAAVIAKVR KVIGKDIPVL
ITGETGTGKE LLAQAIHNDS PRRDGPFVAV NCASIPETLI ESELFGYEEG AFTGARRKGA
TGKLLQANGG TLFLDEIGDM PYPLQVRLLR VLQERIVNPL GSTKAIGVDI AIICATHRDL
RDMIAQNRFR EDLYYRLNGL VVRLPPLRDR TDLAVVVQKM LQRETLSGPG RRPLSVAPDV
MALFERCAWP GNFRQLANLL RTAAAMVDDD CEIRCEHLPD DFFDDVRRDD GPAASGACAP
PPLAAPAPAA AFAACDARLQ DVAASAIAAA LARHGGNVSA AARALGVSRN TIYRKMPAAG
SEALEPDER
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