| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5895 |
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| Symbol | |
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| ID | 6182478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 432476 |
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| End bp | 434203 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689026 |
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| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
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| Protein accession | YP_001815885 |
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| Protein GI | 172065173 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.136104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.867214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCTCGGCTTC GACGCGCCGA CTGGCAACGA TCGGCATCGC GGCAGCCGTC
GCCATCGCCT TGAATCCCGG CCTCGTGGAC GCCGCCGCCG ATTATCCGGC CGTCACGTAC
CAGCGCCTCA CGGACGCGCA ACGCGATCCC GGCTGGCTCA CCTACTACCG CACATACAAC
GGGCAGTCGC ATTCGCCGCT CAAGCAGATC GACCCGTCGA ACGTGAAGCA GCTCACGCAG
GCGTGGAGCT ACAAGTTTCC GGCCGAGTTG AAGCAGGGTT TCGAAGCCAC GCCGATCGTC
AACGGGCGCT ACCTGTTCGT GACCACGCCG AAGGACAACG TGTACGCGTT CGACGCGGCC
ACCGGCGCGC AGCTGTGGAA ATACGAGCCG AAGCTCGGCG CGGAATCGTT CAAGACGGCC
TGCTGCGACG TCGTGAACCG CGGTGTCGCG CTGTACGGCA AGAACGTCTA CGTCGCGATG
CTGAGCGGCG AAGTGGCCGC ACTCGATGCG CAGACCGGCG CGCTCGTGTG GAAGAAGCAG
ATGTTCGAGC CGGGGCTCGG CTACGCGTTC TCGCTCGCGC CGCTCGCGAT CGACGGCGCG
ATCGTGGTCG GCAGCTCGGG CGGCGAGTAC GGCGCGCGCG GCTTCATCGC CGCGTTGAGC
CCGAACGACG GCGCGCTGCT GTGGAAGCGC TACACGATCC CCGGCCAGGG CGAGAAGCAC
GCCGATACCT GGCCCGACGG CATGCAGGCG CACGGCGGCG CACCGGCCTG GCTGACCGGC
ACCTACGACG CGGCGACGCG CACGCTGTAC TGGGGCGTCG GCAACCCGGG GCCGTGGCTC
GCGGACCTGC GCCCCGGCGA CAACCTGTAC TCCGATTCGC TGCTCGCGCT GGACCCGAAG
AACGGCGACC TCAAGTGGCA CTACCAGTAC ACGAAGCACG ACACCTGGGA CTACGACGGC
GTCAACACGC CGGTGCTCGC GACGATCAAG TACAAGGGCA AGGAACACGA CGCGATCATC
CACGCGGACC GCAACGGCTA CTTCCACGCG ATCGATCGCG ACACCGGCAA GCTGATCTAT
GCGGAACCGT TCGTGAAGGC GACGTCGGTC ACCGGCTACA CGGAAGACGG CGCGCCGATC
CAGGATCCCG CGAAGTATCC GAAGGTCGGC ACGACGATCG ACACATGCCC GAGCTTCCTC
GGCGGCAAGA ACTGGTGGTC GGTGTCGTAC GACCCGCAAC GCCACCTCGC GATCGTGCCG
GCGCTGCATG CGTGCATGAG CCTGTCGGGC AAGTCGGTCA ACTACATGGA AGGGCTGCCG
TATCTCGGCG AAGGCTTCGA GATCAAGCCC GAGCCGGGCA GCGAAGGCTA CGGCGAACTC
CAGGCGATCG ACGTGAACAC CGGCAAGAAG GTATGGAGCC ACTGGAGCAA GCTGCCGTGG
AACGGCGGCG TCGCGACGAC CGCGAGCGGC CTCGCGTTCA GCGGCTCGCT CGACGGCCAC
CTGTACGCAT TCGACGTGTC GACCGGCAAG GTGCTGTGGG AAAGCCCGAA GCTTGCGAGC
GGGATCATCG CGCAGCCGTC GGTGTTTGAA GTCGATGGCA AGGAGTACGT AGCGGTACTC
GCCGGCTACG GCGGCGCGAA CCCGATCTGG GGCGGCCCGA TGGCCAAGGC GGCGGACGAC
GTGCCGCGCG GCGGCACGCT GTACGTGTTC GCCCTCGACC GCGGCTGA
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| Protein sequence | MKKLSASTRR LATIGIAAAV AIALNPGLVD AAADYPAVTY QRLTDAQRDP GWLTYYRTYN
GQSHSPLKQI DPSNVKQLTQ AWSYKFPAEL KQGFEATPIV NGRYLFVTTP KDNVYAFDAA
TGAQLWKYEP KLGAESFKTA CCDVVNRGVA LYGKNVYVAM LSGEVAALDA QTGALVWKKQ
MFEPGLGYAF SLAPLAIDGA IVVGSSGGEY GARGFIAALS PNDGALLWKR YTIPGQGEKH
ADTWPDGMQA HGGAPAWLTG TYDAATRTLY WGVGNPGPWL ADLRPGDNLY SDSLLALDPK
NGDLKWHYQY TKHDTWDYDG VNTPVLATIK YKGKEHDAII HADRNGYFHA IDRDTGKLIY
AEPFVKATSV TGYTEDGAPI QDPAKYPKVG TTIDTCPSFL GGKNWWSVSY DPQRHLAIVP
ALHACMSLSG KSVNYMEGLP YLGEGFEIKP EPGSEGYGEL QAIDVNTGKK VWSHWSKLPW
NGGVATTASG LAFSGSLDGH LYAFDVSTGK VLWESPKLAS GIIAQPSVFE VDGKEYVAVL
AGYGGANPIW GGPMAKAADD VPRGGTLYVF ALDRG
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