| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5889 |
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| Symbol | |
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| ID | 6182472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 423331 |
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| End bp | 424800 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689020 |
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| Product | general substrate transporter |
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| Protein accession | YP_001815879 |
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| Protein GI | 172065167 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTTCAT CGCAAGCGCA CCCCGCGAAA GCCCGGTCTT CGCGCAAGGC CCTGAAGCTG
GACGACATCA CGATCGTCGA CCCGGCCGTC CTGAAACGCG CGGTCGGGGC CATGGCGTTC
GGCAACGCGA TGGAATGGTT CGACTTCGGC GTCTACAGCT ATATCGCCGT CACGCTCGGC
AAGGTGTTCT TCCCGTCGAG CAGCCCGTCC GCGCAGCTGC TCGCGACCTT CGGCACGTTC
GCGGCCGCGT TCCTCGTGCG CCCGCTCGGC GGCATGGTGT TCGGCCCGCT GGGCGACCGC
ATCGGCCGCC AGCGCGTGCT CGCCGCCACG ATGATCATGA TGGCCGTCGG CACCTTCGCG
ATCGGTCTGA TCCCCAGCTA CGCGTCGATC GGCATCATGG CGCCCGTGCT GCTGCTCGTC
GCCCGCCTCG TGCAGGGCTT CTCGACCGGC GGCGAATACG GCGGCGCCGC CACCTTCATC
GCCGAGTTCT CGACCGACAA GCGCCGCGGC TTCATGGGCA GCTTCCTCGA GTTCGGCACG
CTGATCGGCT ACACGCTCGG CGCGGCCACC GTCGCGGTGC TCTCGGCCAC GCTGTCGCAG
GATGCGCTGC TGTCGTGGGG CTGGCGCGTG CCGTTCTTCA TCGCCGGGCC GCTCGGCCTC
GTCGGCCTGT ACGTGCGGCT CAAGCTCGAG GAAACGCCCG CGTTCAAGAA GGAAGCCGAA
TCGCGCGAAG CGGACGAGCG CTCGCGCCCG AAGCAGTCGT TCGGCACGCT GCTCGTCGAA
CAGTGGAAGC CGCTGCTCCA GTGCGTCGGC CTGGTGCTGA TCTTCAACGT GACCGACTAC
ATGGCGCTGT CGTACCTGCC GAACTACCTG TCGGCGACGC TGCACTTCAA CGAGACGCAC
GGCCTCTTCA TGGTGCTGAT CGTGATGGTG CTGATGATGC CGATGACGCT CTACGCGGGC
CATCTGTCGG ACCGCGTCGG CCGCAAGCCG GTGATGATGG CCGGCTGCGT CGGCCTGCTC
GTGCTGTCGG TGCCGGCGCT GCTGCTGATC CGCACGGGCG GGATGCTGCC CGTGTTCGGC
GGGATGCTGA TCTACGGCAC GCTGCTGTCG ACCTTCACCG GCGTGATGCC GTCCGCGCTG
CCCGCGCTGT TCCCGACGCG GATCCGCTAC GGCGCGCTCG CGATCGGCTT CAACGTATCG
GTGTCGCTGT TCGGCGGCAC GACGCCGCTC GTCACCGCAT GGCTCGTCGA TCGCACTGGC
GACCTGATGA TGCCGGCCTA CTACCTGATG GGTGCGTCGT TCATCGGCAT CGTGTCGGTG
CTAGCGCTGC GCGAAACCGC ACGGCGGCCG CTGCCCGGTT CCGCTCCATG CGTCGCGAGC
CGTGCGGAAG CGCAGGACCT GATTCGCCGC GGCGCCGACG AAGGCCGCGT GCGCGACCGC
AAGTTCACGC CGATCGGTGA ACGCGCGTAA
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| Protein sequence | MSSSQAHPAK ARSSRKALKL DDITIVDPAV LKRAVGAMAF GNAMEWFDFG VYSYIAVTLG
KVFFPSSSPS AQLLATFGTF AAAFLVRPLG GMVFGPLGDR IGRQRVLAAT MIMMAVGTFA
IGLIPSYASI GIMAPVLLLV ARLVQGFSTG GEYGGAATFI AEFSTDKRRG FMGSFLEFGT
LIGYTLGAAT VAVLSATLSQ DALLSWGWRV PFFIAGPLGL VGLYVRLKLE ETPAFKKEAE
SREADERSRP KQSFGTLLVE QWKPLLQCVG LVLIFNVTDY MALSYLPNYL SATLHFNETH
GLFMVLIVMV LMMPMTLYAG HLSDRVGRKP VMMAGCVGLL VLSVPALLLI RTGGMLPVFG
GMLIYGTLLS TFTGVMPSAL PALFPTRIRY GALAIGFNVS VSLFGGTTPL VTAWLVDRTG
DLMMPAYYLM GASFIGIVSV LALRETARRP LPGSAPCVAS RAEAQDLIRR GADEGRVRDR
KFTPIGERA
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