| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5884 |
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| Symbol | |
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| ID | 6182467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 417472 |
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| End bp | 418050 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689015 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001815874 |
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| Protein GI | 172065162 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.868639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGTC GCACTTCCCT GAACGGCGCG GCGGCCGTGG GCTCGCCGGA CGCGGCGGCC
GCGGACGGTG CGGCGCCGGG CCGGCCGCGC GCAGCCGCGC CGCTGTTGCG CTGCGCGAAC
GACCTGCTGT TCCGCGCGCT GGCCGTGATC GCGTCGCTGT GTCTCGCGGC GCTCACGCTG
CTGGTGTTCT ACGCGGTGGT GATGCGCTAC GTGTTCGAGA ACGCGCCCGA TTTCGTCGAG
CCGATCGCGC TGCTGCTGGT GATCGTGATC GCGATGTTCG GCGCGGCGAT GAAGGTGCGC
GACGGCGGCC ATATCGGCCT CGACTCGCTG GTGCGGCGCC TGTCGCCGGG CCCGCGCACC
GTGGTGATCG CGATCCAGCA CTTGAGCCTG ATCGCGTTCG CGATCGCGAT CATGGTCGGC
TGCGGCAGCA TGGCCGCCGA GACGATGGCC GACCGCATCC CGATCATCGG GCTGCCCGAA
GGCGTGCGCT ACCTGATCAC GATTCCCGCG GCGATCGCGA TCGTCCTCTT CTCGCTCGAG
CACCTGCTCG CGCTTCGTCG TTCTTCGTCG GGACAATAA
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| Protein sequence | MTRRTSLNGA AAVGSPDAAA ADGAAPGRPR AAAPLLRCAN DLLFRALAVI ASLCLAALTL
LVFYAVVMRY VFENAPDFVE PIALLLVIVI AMFGAAMKVR DGGHIGLDSL VRRLSPGPRT
VVIAIQHLSL IAFAIAIMVG CGSMAAETMA DRIPIIGLPE GVRYLITIPA AIAIVLFSLE
HLLALRRSSS GQ
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