| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5877 |
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| Symbol | |
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| ID | 6182775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 409094 |
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| End bp | 410035 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641689008 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815867 |
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| Protein GI | 172065155 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.673502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA GACAATTACG CTATTTTCTC AGCGTCGTCG AACACGGAAG CATGGGCAAG
GCAGCGCTGG AGCTCGGCGT GGTGACCTCG GCATTGAGTC AGCAGATCAG CCGTCTGGAA
GGCGAACTAT CGACGCGTCT GCTCCAACGC ACCTCGGGCG GCGTCGTTCC GACTGACGCG
GGTTTGGCGT TCTGGCGTCA GGCGCAACTC GCGCTGCGTC ATATCGACGA TGCAGCGCTC
GCGGCCCGCT CCGCACGTCT GTCAGGCCAC GTCAGCGTCG GCATGGCGCC CAGCACGGCG
AGCGTGCTGG GTGTCGCATT CATGCAGGCC ATGCGTTCAC GCTATCCCGA CGTGCGGCTG
CACATGGTCG AAAGCCTGTC CGGCTATCTC GCGTCCATGC TGAGCGCGCG TCAGATCGAT
CTCGCCGTGC TGTTCCGCGA GGAACCCGCG CAACGCTGGA GCGTGCTGCC GCTGCTGGAC
GAGCGGCTGT TTCTGATCGG CGCGAGCGAT CTGGATGGCA TGCCGACCAG CACATCCGTC
CGCCTAAAAA ATCTCGGCAA GCTTCCGCTC ATTCTTCCCA GCGGCACGCA CGGGCTGCGT
TCGCAGCTGT TATCAGCGTT CAAGCGCGCC GAATATCAGC CGAACATCGT CGCCGAAGTC
GACGGCCTGG CGCTTCTGAT GGACTTCGTC CGCACGGGCA TCGGCGCGAC GATACAGCCG
GGCGCTGCGC TGGCAAGGCC CGAGAACGTA ATACTAAAGA GCGTTCCCGT CGCGGAGAAA
TACGCCACGC GGCCAAACAT GCTCGCCAGC ATCTCCGACG ACGAACTGTC TCCCGCCGGT
CTTGCTGCGC GCGTGGTGCT CGTCGATGTC GCCCGTCAAC TCGTGCAGGA AGGGCGCTGG
CCAGGTGCGC GATTGCGGGA CCATGGTCTT CACAAAAGAT GA
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| Protein sequence | MELRQLRYFL SVVEHGSMGK AALELGVVTS ALSQQISRLE GELSTRLLQR TSGGVVPTDA
GLAFWRQAQL ALRHIDDAAL AARSARLSGH VSVGMAPSTA SVLGVAFMQA MRSRYPDVRL
HMVESLSGYL ASMLSARQID LAVLFREEPA QRWSVLPLLD ERLFLIGASD LDGMPTSTSV
RLKNLGKLPL ILPSGTHGLR SQLLSAFKRA EYQPNIVAEV DGLALLMDFV RTGIGATIQP
GAALARPENV ILKSVPVAEK YATRPNMLAS ISDDELSPAG LAARVVLVDV ARQLVQEGRW
PGARLRDHGL HKR
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