Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5875 |
Symbol | |
ID | 6182773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 407201 |
End bp | 408067 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689006 |
Product | NmrA family protein |
Protein accession | YP_001815865 |
Protein GI | 172065153 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGCAA TAACAGGAAT CACCGGCCAG GTTGGCGGCG CACTGGCCCG CGAGCTGCTG GCCACAGGTC AGCCGGTGCG CGCGGTCGTG CGCGATGCGA CGCGGGCAGG ATCATGGGCA GACCGAGGTT GCGAGATCGC GACTGCTTTC ATGGAAGACG CTGCGTCACT GGCCGCCGCG TTCGAGGGCG CCGCTGGCGT TTTCATTCTG CCGCCTTCGG AGTTCGATCC GGCGCCCGGG TTTCCCGAAG CGCGGAAGGT GATCGAGGCT GTATCCGCAG CGCTCCTGAA GGCGCGGCCC GAAAAAGTCG TTTGCCTGTC GACGATCGGC GCACAGGCCG ACGAGATCAA TCTGCTCACT CAACGCACGC TGATGGAGCA GGCACTGCGC GAGATGCCGA TGCCGGTGAC GTTCCTGCGG CCTGGCTGGT TCATGGAAAA CGCCACGTGG GATGTCGCGT CCGCGCGCGA CGAGGGCGTC ATTGCCAGTT ACCTGCAACC GCTCGACAAG CCCGTGCCGA TGGTGGCTAC CGCGGACGTA GGCCGCGTTG CGGCCGAACT GCTCCAGCAG ACGTGGCGCG GTGTGCGCGT GGTCGAGCTC GAGGGCCCGC GCCGGGTGAG CCCCAATGAT CTCGCATTGG CCTTCGCGCA CGTGCTGGGT GCGCCGGTAC GCGCGGAAGT TGTCGACAGG CAGACGTGGG AATCGCTGTT CCGCGGGCAG GGCATGAAGC ATCCTCTACC CCGGATGCGC ATGCTGGACG GCTTCAACGA AGGCTGGATC GATTTCGAAA GTAATCCTGA TGAAATCGTG CGTGGTCGCG TCGAACTGGA GACGGTTCTG CGCGAGCTTG TGTCGTGTGC GGTCTGA
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Protein sequence | MYAITGITGQ VGGALARELL ATGQPVRAVV RDATRAGSWA DRGCEIATAF MEDAASLAAA FEGAAGVFIL PPSEFDPAPG FPEARKVIEA VSAALLKARP EKVVCLSTIG AQADEINLLT QRTLMEQALR EMPMPVTFLR PGWFMENATW DVASARDEGV IASYLQPLDK PVPMVATADV GRVAAELLQQ TWRGVRVVEL EGPRRVSPND LALAFAHVLG APVRAEVVDR QTWESLFRGQ GMKHPLPRMR MLDGFNEGWI DFESNPDEIV RGRVELETVL RELVSCAV
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