Gene BamMC406_5875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5875 
Symbol 
ID6182773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp407201 
End bp408067 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID641689006 
ProductNmrA family protein 
Protein accessionYP_001815865 
Protein GI172065153 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAA TAACAGGAAT CACCGGCCAG GTTGGCGGCG CACTGGCCCG CGAGCTGCTG 
GCCACAGGTC AGCCGGTGCG CGCGGTCGTG CGCGATGCGA CGCGGGCAGG ATCATGGGCA
GACCGAGGTT GCGAGATCGC GACTGCTTTC ATGGAAGACG CTGCGTCACT GGCCGCCGCG
TTCGAGGGCG CCGCTGGCGT TTTCATTCTG CCGCCTTCGG AGTTCGATCC GGCGCCCGGG
TTTCCCGAAG CGCGGAAGGT GATCGAGGCT GTATCCGCAG CGCTCCTGAA GGCGCGGCCC
GAAAAAGTCG TTTGCCTGTC GACGATCGGC GCACAGGCCG ACGAGATCAA TCTGCTCACT
CAACGCACGC TGATGGAGCA GGCACTGCGC GAGATGCCGA TGCCGGTGAC GTTCCTGCGG
CCTGGCTGGT TCATGGAAAA CGCCACGTGG GATGTCGCGT CCGCGCGCGA CGAGGGCGTC
ATTGCCAGTT ACCTGCAACC GCTCGACAAG CCCGTGCCGA TGGTGGCTAC CGCGGACGTA
GGCCGCGTTG CGGCCGAACT GCTCCAGCAG ACGTGGCGCG GTGTGCGCGT GGTCGAGCTC
GAGGGCCCGC GCCGGGTGAG CCCCAATGAT CTCGCATTGG CCTTCGCGCA CGTGCTGGGT
GCGCCGGTAC GCGCGGAAGT TGTCGACAGG CAGACGTGGG AATCGCTGTT CCGCGGGCAG
GGCATGAAGC ATCCTCTACC CCGGATGCGC ATGCTGGACG GCTTCAACGA AGGCTGGATC
GATTTCGAAA GTAATCCTGA TGAAATCGTG CGTGGTCGCG TCGAACTGGA GACGGTTCTG
CGCGAGCTTG TGTCGTGTGC GGTCTGA
 
Protein sequence
MYAITGITGQ VGGALARELL ATGQPVRAVV RDATRAGSWA DRGCEIATAF MEDAASLAAA 
FEGAAGVFIL PPSEFDPAPG FPEARKVIEA VSAALLKARP EKVVCLSTIG AQADEINLLT
QRTLMEQALR EMPMPVTFLR PGWFMENATW DVASARDEGV IASYLQPLDK PVPMVATADV
GRVAAELLQQ TWRGVRVVEL EGPRRVSPND LALAFAHVLG APVRAEVVDR QTWESLFRGQ
GMKHPLPRMR MLDGFNEGWI DFESNPDEIV RGRVELETVL RELVSCAV