Gene BamMC406_5860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5860 
Symbol 
ID6182759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp391310 
End bp392497 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID641688992 
Producthypothetical protein 
Protein accessionYP_001815851 
Protein GI172065139 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.232479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGA ATCCTTTTCG CCTTCGTCGC GCCCGTCTGC TCGCCGCGCT GACGCTTGCC 
ACCACCGCCG TCGCCGCGCA CGCGACCGAC TGGATCGTGT CCGGCAACGA CGGCAAGTAC
CAGCGCGTCG AAGGCCGCGA CACCTTTCTT GCATCGCCGC CTGCCGACAC GCTGACGCTG
CTCGATGCCA GCGTGTTCCC TCCGAAGGTC GCGCTGCAGG TCGACGTCGA GAACGGCATC
CAGGGGCCGC CGCAGGCCGT CGCGATCACG CCCGACGCGA AACTCGCGCT GGTCGGCGCG
CCGACGCTTT ACGACCCGGG CGCGAAGCAG CTCGTGTACG ACACGTTCCT GCAGGTCGTG
AATCTCGATG TGTCGCCGGC GGCGATCACG CGCATCGAAC TCGGCACGCA CCCGCAGGGG
ATCGCGATCG ACCGGTCGGG TCGCGTCGCG CTGGTGGCGA ACGTCGACGG CAGCGTGTCG
ATCCTGCGGA TCGACGGCAC GCAGGTGACG CTCGACGGCA ACCTGAAGAT CGGCAAGAAG
CGGCTCGCCG GGATCAGCTT CACGCACGAC GGCAAGCATG CACTCGTGTC GCTGCGCGAC
GAGCAGGGCG TCGCGGTGCT GAACGTCGAC GACGGCAAGG TGACCGACAG CGGCGCGCGG
CTGAGCACGG GCGTTGCGCC TTACACGATC GACGTGTCGA GCGACAACCG CTGGGCCGTC
GTCAGCAACG TCGGGCTCGC GGGGCTGCCG GGCTATACGG GCACGCTCGC GGGCGATGCC
GATTCGGTCG CGCTGATCGA TGTGTCGCGC ACGCCGTTCC GCACGGTCCA GTACCTGAAC
GTGCCGTCGT TGCCGGAAGG CGTCGCGATC TCGCCGAACG GCAAGTGGAT CGCCGTGCAG
GCGATGGACG GCTCGAACCT CACGCCGGAC AACCCAGGCC GCCACAAGCT CGGCAAGGTC
GTGCTGTTCG AGATCCGCAA CGGCCGCGCG GTGCAGACGA GTGAAGTGCC GGGCGGCGAA
GCCGCGCAGG GCATCGTATT CACCGCCGAC AGCCGGCACG TGATCGTGCA GTTCAACGTC
GAGCGGCAGC TTGCGCTGTA TGCGGTGGAA GGCGGCCAGC TGCGCGATAC GGGCAAGCGC
ATTGCGCTGT CGGGCGGGCC GTCGTCGTTG CGGACGTTGC CGCGCTGA
 
Protein sequence
MHSNPFRLRR ARLLAALTLA TTAVAAHATD WIVSGNDGKY QRVEGRDTFL ASPPADTLTL 
LDASVFPPKV ALQVDVENGI QGPPQAVAIT PDAKLALVGA PTLYDPGAKQ LVYDTFLQVV
NLDVSPAAIT RIELGTHPQG IAIDRSGRVA LVANVDGSVS ILRIDGTQVT LDGNLKIGKK
RLAGISFTHD GKHALVSLRD EQGVAVLNVD DGKVTDSGAR LSTGVAPYTI DVSSDNRWAV
VSNVGLAGLP GYTGTLAGDA DSVALIDVSR TPFRTVQYLN VPSLPEGVAI SPNGKWIAVQ
AMDGSNLTPD NPGRHKLGKV VLFEIRNGRA VQTSEVPGGE AAQGIVFTAD SRHVIVQFNV
ERQLALYAVE GGQLRDTGKR IALSGGPSSL RTLPR