Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5860 |
Symbol | |
ID | 6182759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 391310 |
End bp | 392497 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641688992 |
Product | hypothetical protein |
Protein accession | YP_001815851 |
Protein GI | 172065139 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.232479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCGA ATCCTTTTCG CCTTCGTCGC GCCCGTCTGC TCGCCGCGCT GACGCTTGCC ACCACCGCCG TCGCCGCGCA CGCGACCGAC TGGATCGTGT CCGGCAACGA CGGCAAGTAC CAGCGCGTCG AAGGCCGCGA CACCTTTCTT GCATCGCCGC CTGCCGACAC GCTGACGCTG CTCGATGCCA GCGTGTTCCC TCCGAAGGTC GCGCTGCAGG TCGACGTCGA GAACGGCATC CAGGGGCCGC CGCAGGCCGT CGCGATCACG CCCGACGCGA AACTCGCGCT GGTCGGCGCG CCGACGCTTT ACGACCCGGG CGCGAAGCAG CTCGTGTACG ACACGTTCCT GCAGGTCGTG AATCTCGATG TGTCGCCGGC GGCGATCACG CGCATCGAAC TCGGCACGCA CCCGCAGGGG ATCGCGATCG ACCGGTCGGG TCGCGTCGCG CTGGTGGCGA ACGTCGACGG CAGCGTGTCG ATCCTGCGGA TCGACGGCAC GCAGGTGACG CTCGACGGCA ACCTGAAGAT CGGCAAGAAG CGGCTCGCCG GGATCAGCTT CACGCACGAC GGCAAGCATG CACTCGTGTC GCTGCGCGAC GAGCAGGGCG TCGCGGTGCT GAACGTCGAC GACGGCAAGG TGACCGACAG CGGCGCGCGG CTGAGCACGG GCGTTGCGCC TTACACGATC GACGTGTCGA GCGACAACCG CTGGGCCGTC GTCAGCAACG TCGGGCTCGC GGGGCTGCCG GGCTATACGG GCACGCTCGC GGGCGATGCC GATTCGGTCG CGCTGATCGA TGTGTCGCGC ACGCCGTTCC GCACGGTCCA GTACCTGAAC GTGCCGTCGT TGCCGGAAGG CGTCGCGATC TCGCCGAACG GCAAGTGGAT CGCCGTGCAG GCGATGGACG GCTCGAACCT CACGCCGGAC AACCCAGGCC GCCACAAGCT CGGCAAGGTC GTGCTGTTCG AGATCCGCAA CGGCCGCGCG GTGCAGACGA GTGAAGTGCC GGGCGGCGAA GCCGCGCAGG GCATCGTATT CACCGCCGAC AGCCGGCACG TGATCGTGCA GTTCAACGTC GAGCGGCAGC TTGCGCTGTA TGCGGTGGAA GGCGGCCAGC TGCGCGATAC GGGCAAGCGC ATTGCGCTGT CGGGCGGGCC GTCGTCGTTG CGGACGTTGC CGCGCTGA
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Protein sequence | MHSNPFRLRR ARLLAALTLA TTAVAAHATD WIVSGNDGKY QRVEGRDTFL ASPPADTLTL LDASVFPPKV ALQVDVENGI QGPPQAVAIT PDAKLALVGA PTLYDPGAKQ LVYDTFLQVV NLDVSPAAIT RIELGTHPQG IAIDRSGRVA LVANVDGSVS ILRIDGTQVT LDGNLKIGKK RLAGISFTHD GKHALVSLRD EQGVAVLNVD DGKVTDSGAR LSTGVAPYTI DVSSDNRWAV VSNVGLAGLP GYTGTLAGDA DSVALIDVSR TPFRTVQYLN VPSLPEGVAI SPNGKWIAVQ AMDGSNLTPD NPGRHKLGKV VLFEIRNGRA VQTSEVPGGE AAQGIVFTAD SRHVIVQFNV ERQLALYAVE GGQLRDTGKR IALSGGPSSL RTLPR
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