| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5857 |
|---|
| Symbol | |
|---|
| ID | 6182664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 386777 |
|---|
| End bp | 388174 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641688989 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001815848 |
|---|
| Protein GI | 172065136 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.576108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTA TTGACGTCAA TCTCGATGCG GACCTGCAGG CGCTCGGCAA GCGCCACCTG
CTGATGCACT TCACGCACGC CGATGCCTAT CGCGAGCAGG CGCTGACGGT GTTCGACCGC
GGCGAAGGCT GCTGGCTCGT CGACCGCAAC GGCAAGCGCT ACTTCGACGC GCTCGCCGGG
CTGTACTGCG TGCAGGTCGG CTACAGCCAT GGCGCGGAGA TCGGCGACGC GATCCGCGAG
CAGATGGTGC GGCTGCCGTT CGCGACCAAC TGGGGCTACG GCCACGAACC GGCGATCCGT
CTCGCGCACA AGCTCGCGGC GCTCGCGCCG GGCGGCCTGA ACCGCGTGTT CTTCACGTCG
AGCGGCTCGG AGTCGAACGA GTCGGCGATC AAACTGGTGC GCCAGTACCA TCAGGCGCGC
GGCGAGCCGC AGCGGCGCAA GTTCATCGCG CGGCGTGTCG CGTATCACGG CACGTCGTTC
GGCGCACTCG CGCTGAACGG GATGACCAAC TTCCGCAAGC ATTTCGAGCC GCTGATGGCG
GGCGTGCGGC ACGTGAGCAA CACGAAGCGC TATGGGCGGC CGGAAGGCGA GACGGAAGCG
CAGTTCACGC GCCATCTGCT CGACGAGATC GAATCGCTGA TCGTGCAGGA GGGGCCGGAT
ACCGTCGCCG CGATCGTCGT CGAGCCGCTG CAGAACGCGG GCGGCAGCCT GACGCCGCCG
GCCGGCTACG CGGCCGGGCT GCGCGACATC TGCGACCGGC ACGGCGTGCT GCTCGTCGCG
GACGAGGTGA TCTGCGGGTT CGGCCGGCTC GGCGAATATT TTGGCGCCGC GCGCTACGGG
CTGAAGCCAG ACATCATCAC GTTCGCGAAA GGCATCGCGT CGGGCTACGT GCCGCTGGGC
GGCGTGATCG CGAGCGACGC GGTCGTCGAC ACCGTGCTCG ACGGCCCGCA GCAGATGTTC
CTGCACGGTG CGACGTACGG CGGCCACCCG GTCGCATGCA CGGCCGCGCT CGCGAACCTC
GCGATCATGG AGCGCGAAGG CGTGCTCGAG AACGTGCGCA GCAACGAAGC GGTGTTCCGC
CAGACGCTCG ACGGCCTGCT CGAGCTGCCG TGCGTTGGCG ACGTGCGCGG CGACGGCTAT
CACTACTCGC TCGAACTCGT GACCGACAAG GCCGCGCGCC GCTGGGCGGC CGGCATCGGC
GCGCAGGCCT TCGTGTCGAC GCTGCTCGCG CCCGCGATCT TCGAAGCGGG GCTGCTGTGC
CGCGCGGGCG TCGACCACGA AGGCACGCCG ATCGTGCAGT TCTCGCCGCC GCTCGTGATG
TCGCGCGACG AGATCGTCTG GTTCGTCGCG AAGATCCGCG ACATCGTCGC CGATACCTAT
GCGCGTGCGA CGCGCTGA
|
|---|
| Protein sequence | MNGIDVNLDA DLQALGKRHL LMHFTHADAY REQALTVFDR GEGCWLVDRN GKRYFDALAG
LYCVQVGYSH GAEIGDAIRE QMVRLPFATN WGYGHEPAIR LAHKLAALAP GGLNRVFFTS
SGSESNESAI KLVRQYHQAR GEPQRRKFIA RRVAYHGTSF GALALNGMTN FRKHFEPLMA
GVRHVSNTKR YGRPEGETEA QFTRHLLDEI ESLIVQEGPD TVAAIVVEPL QNAGGSLTPP
AGYAAGLRDI CDRHGVLLVA DEVICGFGRL GEYFGAARYG LKPDIITFAK GIASGYVPLG
GVIASDAVVD TVLDGPQQMF LHGATYGGHP VACTAALANL AIMEREGVLE NVRSNEAVFR
QTLDGLLELP CVGDVRGDGY HYSLELVTDK AARRWAAGIG AQAFVSTLLA PAIFEAGLLC
RAGVDHEGTP IVQFSPPLVM SRDEIVWFVA KIRDIVADTY ARATR
|
|---|
| |