| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5855 |
|---|
| Symbol | |
|---|
| ID | 6182662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 383919 |
|---|
| End bp | 385076 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641688987 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001815846 |
|---|
| Protein GI | 172065134 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCA AGTCCCATCG ACCTCAAAGC CGCGCCGAAC GCAGCCTGCG TTCGGCGCTC
GGCCTCGCGC GTCCCGCCGG ACGCCAGGAG GACATTCCCG CCACCGTGCA CGCGATCGCG
GCCGCGCTCG ACGAGTGCCG CGTCCGGCAT ATCGATGGCA CGGTGCTGCT CGACGGCACA
GGCCTCGGCG CGGCCGAAGT CGCGTCGCCG AGCCTGCACG TGAATCGAGG CCAGGAGCAG
CGCTGCTTTC GCAATCTGCT GCGCTGCACC GGCTTGCCGT CGATCGGCCT GTCGATCGGC
GCGCGGCTCC ATGTGTCGAC GCTCGGCCTC GCCGGCTACG CGATGCTGAT CAGCGGCTCC
GTGATGCAGG CGTTCCGGTG CATGAGCCAG TTTCCGTTGT TCATGGGCTT GTATTTCGAC
GTGCGCGTGC ATGCGCATGC GCAAGGCATG AGCGTGACGA TCGACCGGTA CAACGGCGAA
CCCGACATCG AGGTGTTCCA GACCGACATG TGCCTGTCGA GCCTGCGGCT GATCGTGTCC
GACCTGGTCG GCAAGCCGGT GTGGCCCGCC CGGTTGCATC TCGCGCGCCG CGCGCCGCGC
AACGGCGCGG ACTACGCGCA TCACTTCGGC TGCCCGGTCG CGTTCAATGC CGGCGAGAAC
CGGCTCGTGT TCACGAGCGT GAACGGCACC GAGGTGCCGC GGCTCGCGAA CGAAGTCAGC
TTCAATGCGC TGCACGGACA GTGCGAAGCG CTCGAGCGAC AGTGGGCGGC GTCGATCGGC
ACGCGCTTCG CCGACCGCGC GAAGGAATTG ATGGCGCGCG ACCTCGTGCG CTTCAAGTCG
ATGACGTCGC TCGCGAACGC GCTGCATCTG ACCGAGCGCA CGTTGCGACG CCGGCTCGAG
AAGGACGGCA TCACGTTTCA GTCGCTACTG GACGACGTGC GTCGTCAGGA GGCGGTGCGG
CTGCTCGACG AGCCGACGCT GAGCGTGGCC GCGATCGCGG AGCGGCTCGG CTACAGCGAA
CCGCGCAGCT TCCGCCACGC GTATCGGCGC TGGACCGGCA AGACGCCGCG CGCGGGCGCG
GGTTCGGACG GCGACGCGTG CGGCGGCGTG GCCGTGCACA CGTCCGATTC CAGCGGGCGT
AGATGCCGCG CAGAGTGA
|
|---|
| Protein sequence | MDSKSHRPQS RAERSLRSAL GLARPAGRQE DIPATVHAIA AALDECRVRH IDGTVLLDGT
GLGAAEVASP SLHVNRGQEQ RCFRNLLRCT GLPSIGLSIG ARLHVSTLGL AGYAMLISGS
VMQAFRCMSQ FPLFMGLYFD VRVHAHAQGM SVTIDRYNGE PDIEVFQTDM CLSSLRLIVS
DLVGKPVWPA RLHLARRAPR NGADYAHHFG CPVAFNAGEN RLVFTSVNGT EVPRLANEVS
FNALHGQCEA LERQWAASIG TRFADRAKEL MARDLVRFKS MTSLANALHL TERTLRRRLE
KDGITFQSLL DDVRRQEAVR LLDEPTLSVA AIAERLGYSE PRSFRHAYRR WTGKTPRAGA
GSDGDACGGV AVHTSDSSGR RCRAE
|
|---|
| |