Gene BamMC406_5844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5844 
Symbol 
ID6182654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp375689 
End bp376714 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID641688979 
Producthypothetical protein 
Protein accessionYP_001815838 
Protein GI172065126 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.914244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCC GGCATGCGCG GTGCGCGAAC CTGCGATCCG CGATGATATT GGCGGTCCTG 
ATGATCGCGC CGATGGCCGC GCATGCGGCC GGCTTCGACT GCACGAAAGC CGCTTCGCCG
ACCGAAAAGG CGATCTGCGC GGATCCCGCG CTGTCGTCGC TCGACGGCCA GCTGGCCGCG
GCGTGGAAGA AGGCGCTCGC GAAAGGCGGC GATACGGCCG CGCTGAAGGC GGCCCAACTG
CAATGGCTGA AGCAGCGCGA CCGCTGCGGC GCCGGCGTGT TGTGCGTCGG CGATCGCTAT
CGCGAGCGGC TCGCGAGCCT GAACGGTGCG CCGCTGGCAG CCGACCGGTG GCAGCAGACG
TGGTATCGCG ACAGCGACAC CCCGTCGTTC GGCGGCGTGC TGACGTTCAC CGGAACGGCG
CCGCGCCTGC ACTTCGAACT GAGCGGCAAC AACGGTGCGA ATACCGGCGG GCTCAGCGGC
GATATCGAAC TGCACGGCGA CCGCGGCACG TTTCGCCAGG ATCAATGCCG GATCGATTTC
AGCCGCAAGG GTGGACGCAT GCAGGTCGAG CAGCAGGGCA GCGATGTCGA TTGCGGCGCC
GGTTCCGGCG TCACGTATTC GGGCGACTAC GTGACGGCAT CGAAGGCGCA GGCGCGTCCG
CCGGCGGATC TAGTTACCCT GAAGGTGCTG ACCGATGCCC GGCAGAACGC GGTCGCGCAC
AAGCTGCTCG GCGCCGACTA TCAGACGCTC GTCGACATGA TCAACATCAG CGCGGACGAG
AAGGATCTCG ACGGCCTGAA CGCCAGCGTG ACGTCGTACT GGGTGCGCGG CATCGCGACG
ACGAACGCCG CGATCGTGAT GCAACGGGGT ACCGACCTGT GGATCGGGCT GCTCGTGTTC
GATGCGCATG ACCAGGTGCG GATGCGCTAC TACTCGAACG TGCCGACGTG GAAAAAGACG
GTGCCGAAGA CCATTCGCGC GTGGCACGAC AAGCTCGACA AGACGCTTCC GATCGACCTG
ATGTGA
 
Protein sequence
MHGRHARCAN LRSAMILAVL MIAPMAAHAA GFDCTKAASP TEKAICADPA LSSLDGQLAA 
AWKKALAKGG DTAALKAAQL QWLKQRDRCG AGVLCVGDRY RERLASLNGA PLAADRWQQT
WYRDSDTPSF GGVLTFTGTA PRLHFELSGN NGANTGGLSG DIELHGDRGT FRQDQCRIDF
SRKGGRMQVE QQGSDVDCGA GSGVTYSGDY VTASKAQARP PADLVTLKVL TDARQNAVAH
KLLGADYQTL VDMINISADE KDLDGLNASV TSYWVRGIAT TNAAIVMQRG TDLWIGLLVF
DAHDQVRMRY YSNVPTWKKT VPKTIRAWHD KLDKTLPIDL M