Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5844 |
Symbol | |
ID | 6182654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 375689 |
End bp | 376714 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641688979 |
Product | hypothetical protein |
Protein accession | YP_001815838 |
Protein GI | 172065126 |
COG category | [S] Function unknown |
COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.914244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGGCC GGCATGCGCG GTGCGCGAAC CTGCGATCCG CGATGATATT GGCGGTCCTG ATGATCGCGC CGATGGCCGC GCATGCGGCC GGCTTCGACT GCACGAAAGC CGCTTCGCCG ACCGAAAAGG CGATCTGCGC GGATCCCGCG CTGTCGTCGC TCGACGGCCA GCTGGCCGCG GCGTGGAAGA AGGCGCTCGC GAAAGGCGGC GATACGGCCG CGCTGAAGGC GGCCCAACTG CAATGGCTGA AGCAGCGCGA CCGCTGCGGC GCCGGCGTGT TGTGCGTCGG CGATCGCTAT CGCGAGCGGC TCGCGAGCCT GAACGGTGCG CCGCTGGCAG CCGACCGGTG GCAGCAGACG TGGTATCGCG ACAGCGACAC CCCGTCGTTC GGCGGCGTGC TGACGTTCAC CGGAACGGCG CCGCGCCTGC ACTTCGAACT GAGCGGCAAC AACGGTGCGA ATACCGGCGG GCTCAGCGGC GATATCGAAC TGCACGGCGA CCGCGGCACG TTTCGCCAGG ATCAATGCCG GATCGATTTC AGCCGCAAGG GTGGACGCAT GCAGGTCGAG CAGCAGGGCA GCGATGTCGA TTGCGGCGCC GGTTCCGGCG TCACGTATTC GGGCGACTAC GTGACGGCAT CGAAGGCGCA GGCGCGTCCG CCGGCGGATC TAGTTACCCT GAAGGTGCTG ACCGATGCCC GGCAGAACGC GGTCGCGCAC AAGCTGCTCG GCGCCGACTA TCAGACGCTC GTCGACATGA TCAACATCAG CGCGGACGAG AAGGATCTCG ACGGCCTGAA CGCCAGCGTG ACGTCGTACT GGGTGCGCGG CATCGCGACG ACGAACGCCG CGATCGTGAT GCAACGGGGT ACCGACCTGT GGATCGGGCT GCTCGTGTTC GATGCGCATG ACCAGGTGCG GATGCGCTAC TACTCGAACG TGCCGACGTG GAAAAAGACG GTGCCGAAGA CCATTCGCGC GTGGCACGAC AAGCTCGACA AGACGCTTCC GATCGACCTG ATGTGA
|
Protein sequence | MHGRHARCAN LRSAMILAVL MIAPMAAHAA GFDCTKAASP TEKAICADPA LSSLDGQLAA AWKKALAKGG DTAALKAAQL QWLKQRDRCG AGVLCVGDRY RERLASLNGA PLAADRWQQT WYRDSDTPSF GGVLTFTGTA PRLHFELSGN NGANTGGLSG DIELHGDRGT FRQDQCRIDF SRKGGRMQVE QQGSDVDCGA GSGVTYSGDY VTASKAQARP PADLVTLKVL TDARQNAVAH KLLGADYQTL VDMINISADE KDLDGLNASV TSYWVRGIAT TNAAIVMQRG TDLWIGLLVF DAHDQVRMRY YSNVPTWKKT VPKTIRAWHD KLDKTLPIDL M
|
| |