Gene BamMC406_5838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5838 
Symbol 
ID6182648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp371328 
End bp371699 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content72% 
IMG OID641688973 
ProductLrgA family protein 
Protein accessionYP_001815832 
Protein GI172065120 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.809167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGG CGTTCGCGGT CTTGCTGACC TTCCAGTGTC TCGGGGAAGG TGTGTCCTAT 
CTGTTCGGCC TGCCGGTGCC GGGCCCCGTG ATCGGCATGC TGCTGCTGTT CGGCTTCGTG
ATGCTGCGCC CGCGGGTGGC CGACGCGATC GAGCCGACCG CGCTCGAGCT GCTGCGCCAT
CTGTCGCTGC TGTTCGTGCC GGCCGGCGTC GGCATCATGG TGTCGGCCGA CCGCGTGCGC
GGCGATGCGC TCGCGGTCAT CGTCGCGCTC GCGGTCAGCA CGTCGCTCGC GATCGCCGTG
ACGGCGCTCG TCACGCGCGC GCTGCTGCGC CGCCAGCGGC GCGGGCACGG CGCGGCGGAG
AGCACGCCAT GA
 
Protein sequence
MLQAFAVLLT FQCLGEGVSY LFGLPVPGPV IGMLLLFGFV MLRPRVADAI EPTALELLRH 
LSLLFVPAGV GIMVSADRVR GDALAVIVAL AVSTSLAIAV TALVTRALLR RQRRGHGAAE
STP