Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5838 |
Symbol | |
ID | 6182648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 371328 |
End bp | 371699 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641688973 |
Product | LrgA family protein |
Protein accession | YP_001815832 |
Protein GI | 172065120 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.809167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGG CGTTCGCGGT CTTGCTGACC TTCCAGTGTC TCGGGGAAGG TGTGTCCTAT CTGTTCGGCC TGCCGGTGCC GGGCCCCGTG ATCGGCATGC TGCTGCTGTT CGGCTTCGTG ATGCTGCGCC CGCGGGTGGC CGACGCGATC GAGCCGACCG CGCTCGAGCT GCTGCGCCAT CTGTCGCTGC TGTTCGTGCC GGCCGGCGTC GGCATCATGG TGTCGGCCGA CCGCGTGCGC GGCGATGCGC TCGCGGTCAT CGTCGCGCTC GCGGTCAGCA CGTCGCTCGC GATCGCCGTG ACGGCGCTCG TCACGCGCGC GCTGCTGCGC CGCCAGCGGC GCGGGCACGG CGCGGCGGAG AGCACGCCAT GA
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Protein sequence | MLQAFAVLLT FQCLGEGVSY LFGLPVPGPV IGMLLLFGFV MLRPRVADAI EPTALELLRH LSLLFVPAGV GIMVSADRVR GDALAVIVAL AVSTSLAIAV TALVTRALLR RQRRGHGAAE STP
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