Gene BamMC406_5813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5813 
Symbol 
ID6182154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp348433 
End bp349677 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID641688948 
Productsodium/hydrogen exchanger 
Protein accessionYP_001815807 
Protein GI172065095 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCT GGTTGGTGCA ACTCATGCTC GTGATCGCGT GCTGCAACGT GTGCGGCCGT 
GTTGCCGAGC GGCTCGGCCA ATGTGCGGTC GTCGGCGAAA TCGCGGCCGG ACTCCTGCTC
GGCCCTTCGC TGTTCGGCGC GATCGCCCCG GATTTCTACG ATGCGCTGTT CGGGCCGCGC
GCGCCGTCGG CGATGGCGCA GGTCGGTGAG ATCGGGCTGG TGTTGCTGAT GTTCCAGCTC
GGGCTGCACA TGGAATTCGG CGTCACGTTG CGCGGCGGCC GGTGGCGCGT GCCCGTCGCC
GTCGCGATCG GCGGCTTGTG CATACCGGCC GCGATCGGCA TGGGTATCGC GATCGTGTCG
AAGGACACGC TCGCGGCCGA TGCACCGTGG CTGCCGTACG TGCTCTTCTG CGGTGTCGCG
CTCGCGGTGT CGGCCGTGCC GGTCATGGCG CGCATCGTCG ACGATCTGCG GCTCGGCGCG
ATGAGCGGCG CGCGGCACGC GATGTCGGCG GCAATGCTGA CGGATGCGCT CGGCTGGATG
TTGCTGGCGA CGATCGCGTC GCTGTCGAAC GGGCCCGGCT GGGCCTTCGC GCGCATGCTC
GCCAGCTTGC TCGTGTTTTT GGCGCTCAGT GCGTTGCTTG CGCGCTTCGT CGTTCGCCCG
CTACTCATGC GGTTGGCGCA AACGGCGCAC GCGACGCGCG ACCGGCTGGC GGTGTTGTTC
TGCTTCGTGC TGGCGTCGGC GGTCGCAACG TCGCTGATCG GTTTCCATAG CGCATTCGGG
GCGCTGTCGG CAGCGCTGTT CCTGCGTCGC GTGCCTGGGT TGGACGTGGA ATGGCGCGAG
AATGTGGAAG GCTTCGTGAA GCTCGTGCTG ATGCCGGTGT TCTTCGCGTA TGCCGGGTTG
CACGCGTCGA TCGGGATGAT CGACGATGCG TCTTCATGGG TGTGGTTCGG CGTGTTTCTC
GCCGGCGGGT TCGCGGGCAA GTTCGGCGGC AGCTACGTCG GTGCGCGCGT GACGGGGCTT
GCGCCGCGCG ATGCGATGCT GATCGGCTCG TTGATGAATA CGCGCGGATT GATGGAACTG
ATCGTGCTGT CGATCGGGCT GCAGATGCAG ATTCTTCCGA CCCGCGTCTA TACGATCCTC
GTCATATTCG CGCTGGTGAC GACGGCGCTG ACCGCGCCGC TCGTGCGGCT CACGCTGCGC
GCGCATTCGC GCTCGGCCCC GGCGATGCAG ATCGTCGGCA AGTGA
 
Protein sequence
MTIWLVQLML VIACCNVCGR VAERLGQCAV VGEIAAGLLL GPSLFGAIAP DFYDALFGPR 
APSAMAQVGE IGLVLLMFQL GLHMEFGVTL RGGRWRVPVA VAIGGLCIPA AIGMGIAIVS
KDTLAADAPW LPYVLFCGVA LAVSAVPVMA RIVDDLRLGA MSGARHAMSA AMLTDALGWM
LLATIASLSN GPGWAFARML ASLLVFLALS ALLARFVVRP LLMRLAQTAH ATRDRLAVLF
CFVLASAVAT SLIGFHSAFG ALSAALFLRR VPGLDVEWRE NVEGFVKLVL MPVFFAYAGL
HASIGMIDDA SSWVWFGVFL AGGFAGKFGG SYVGARVTGL APRDAMLIGS LMNTRGLMEL
IVLSIGLQMQ ILPTRVYTIL VIFALVTTAL TAPLVRLTLR AHSRSAPAMQ IVGK