Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5813 |
Symbol | |
ID | 6182154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 348433 |
End bp | 349677 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641688948 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001815807 |
Protein GI | 172065095 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATCT GGTTGGTGCA ACTCATGCTC GTGATCGCGT GCTGCAACGT GTGCGGCCGT GTTGCCGAGC GGCTCGGCCA ATGTGCGGTC GTCGGCGAAA TCGCGGCCGG ACTCCTGCTC GGCCCTTCGC TGTTCGGCGC GATCGCCCCG GATTTCTACG ATGCGCTGTT CGGGCCGCGC GCGCCGTCGG CGATGGCGCA GGTCGGTGAG ATCGGGCTGG TGTTGCTGAT GTTCCAGCTC GGGCTGCACA TGGAATTCGG CGTCACGTTG CGCGGCGGCC GGTGGCGCGT GCCCGTCGCC GTCGCGATCG GCGGCTTGTG CATACCGGCC GCGATCGGCA TGGGTATCGC GATCGTGTCG AAGGACACGC TCGCGGCCGA TGCACCGTGG CTGCCGTACG TGCTCTTCTG CGGTGTCGCG CTCGCGGTGT CGGCCGTGCC GGTCATGGCG CGCATCGTCG ACGATCTGCG GCTCGGCGCG ATGAGCGGCG CGCGGCACGC GATGTCGGCG GCAATGCTGA CGGATGCGCT CGGCTGGATG TTGCTGGCGA CGATCGCGTC GCTGTCGAAC GGGCCCGGCT GGGCCTTCGC GCGCATGCTC GCCAGCTTGC TCGTGTTTTT GGCGCTCAGT GCGTTGCTTG CGCGCTTCGT CGTTCGCCCG CTACTCATGC GGTTGGCGCA AACGGCGCAC GCGACGCGCG ACCGGCTGGC GGTGTTGTTC TGCTTCGTGC TGGCGTCGGC GGTCGCAACG TCGCTGATCG GTTTCCATAG CGCATTCGGG GCGCTGTCGG CAGCGCTGTT CCTGCGTCGC GTGCCTGGGT TGGACGTGGA ATGGCGCGAG AATGTGGAAG GCTTCGTGAA GCTCGTGCTG ATGCCGGTGT TCTTCGCGTA TGCCGGGTTG CACGCGTCGA TCGGGATGAT CGACGATGCG TCTTCATGGG TGTGGTTCGG CGTGTTTCTC GCCGGCGGGT TCGCGGGCAA GTTCGGCGGC AGCTACGTCG GTGCGCGCGT GACGGGGCTT GCGCCGCGCG ATGCGATGCT GATCGGCTCG TTGATGAATA CGCGCGGATT GATGGAACTG ATCGTGCTGT CGATCGGGCT GCAGATGCAG ATTCTTCCGA CCCGCGTCTA TACGATCCTC GTCATATTCG CGCTGGTGAC GACGGCGCTG ACCGCGCCGC TCGTGCGGCT CACGCTGCGC GCGCATTCGC GCTCGGCCCC GGCGATGCAG ATCGTCGGCA AGTGA
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Protein sequence | MTIWLVQLML VIACCNVCGR VAERLGQCAV VGEIAAGLLL GPSLFGAIAP DFYDALFGPR APSAMAQVGE IGLVLLMFQL GLHMEFGVTL RGGRWRVPVA VAIGGLCIPA AIGMGIAIVS KDTLAADAPW LPYVLFCGVA LAVSAVPVMA RIVDDLRLGA MSGARHAMSA AMLTDALGWM LLATIASLSN GPGWAFARML ASLLVFLALS ALLARFVVRP LLMRLAQTAH ATRDRLAVLF CFVLASAVAT SLIGFHSAFG ALSAALFLRR VPGLDVEWRE NVEGFVKLVL MPVFFAYAGL HASIGMIDDA SSWVWFGVFL AGGFAGKFGG SYVGARVTGL APRDAMLIGS LMNTRGLMEL IVLSIGLQMQ ILPTRVYTIL VIFALVTTAL TAPLVRLTLR AHSRSAPAMQ IVGK
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