| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5812 |
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| Symbol | |
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| ID | 6182153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 347373 |
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| End bp | 348215 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688947 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815806 |
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| Protein GI | 172065094 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG CGGCGCACGC GCTGCATCTG ACCCAGGGCG CGATCAGCCA GCAGATCAAG
CGGCTCGAGG AGTGCTTTGG CCAGCGGCTG TTCGATCGCT CGCAGGGGCG CCTGAAACTC
ACTGCCGCGG GTGAACGTCT GCTCGAGCGG GCAGAGCAGC TCGTGCGGCT CAACGACCGC
ATCTGGGACG ACATGAGCGA GCCGGTATTT GCCGGCGTGC TGCGCGTCGG CGCGCCGTCC
GATCTGGTCG GCACCTATCT CGCCGGCATT TTCAAGGCGT TTGCTCACCA CTATCCGCAC
GTCGAGATCG TGCTCGTCAA TCTTGCGTCG GTCGAACTGT CGGCCGCGCT GCTCGATGGA
AGAGTCGATA TCGCGGTGAT CGAGCAGCCG GCGAGCGAGC CGGGCGGGGA GCGCCTGCGC
ATCGAGCCGC TCGCGTGGGT CGGCGCGGTC GGCGGCAACG CGCACCTGAA GCGGCCGCTC
GCGGTGTCGA TCGTCAGCGA CGCGTGCGTG TTTCGCCCGG CATTGTTCGA CGCGTTGACG
CAGCACGAGA TCGCGTGGCG GACGGTGTTC GAAAACGGCG ACATCGAGGC GACCAAGGCG
ACCGTCCGAA TGGACATGGC GGTGACCGCA TGGCTCGCGT CGACGGTCCC CTCTGATCTG
CAGACGCTGC GACCGGCGCA GGGCTTGCCC ACGTTGCCGG ATTTCGCCGT GACCTTGCAT
CTGCCGCCGT CCGGCACGAC GCCGCTGGTC GAGGAAATGG CGAACTTCAT TCGCAACGGC
TTTCTCCACG CGCCGTCCGT TGGCGATGGC AGGTTGTCCG GTGCGGCCGA TCGCGCGGCT
TGA
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| Protein sequence | MTAAAHALHL TQGAISQQIK RLEECFGQRL FDRSQGRLKL TAAGERLLER AEQLVRLNDR
IWDDMSEPVF AGVLRVGAPS DLVGTYLAGI FKAFAHHYPH VEIVLVNLAS VELSAALLDG
RVDIAVIEQP ASEPGGERLR IEPLAWVGAV GGNAHLKRPL AVSIVSDACV FRPALFDALT
QHEIAWRTVF ENGDIEATKA TVRMDMAVTA WLASTVPSDL QTLRPAQGLP TLPDFAVTLH
LPPSGTTPLV EEMANFIRNG FLHAPSVGDG RLSGAADRAA
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