| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5808 |
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| Symbol | |
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| ID | 6182058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 340970 |
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| End bp | 341860 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641688943 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815802 |
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| Protein GI | 172065090 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC GCCGCCTGAC CCCGTCCATG TCGCTGTTGC TGGTGTTCGA GGCCGCCGCG
CGCCACGAAA GCTACACGCG CGCGGCCGAC GAGCTGTCGC TAAGCCAGAG CGCGATCAGC
CGGCAGGTGC AAACACTCGA GGATCAGCTC GGCGTGCCGC TGTTCCGGCG TGAGGGCCGC
TCCGTGAAGC TGACGGAAGT CGGGCGGCGC TACTTCGTCG AGCTGAGCGG CGCGCTCGGG
CGCATCCGCG GCGCGACGCT GCAGGCGATG TCGCACCAGG CCGGCGCCGG CACGCTGCGG
CTCGCGACGC TGCCGACCTT CGGCTCGAAA TGGCTGCTGC CGCACCTGCA CGACTTCTAT
GCCGCGCATC CGGGCGTGAC CGTGCACCTG CATTCGCGGA TCGGCGGCAT CGACTTCCAT
ACCGACGATC TCGACGCGGC CATCACCGTC GGCGCGGGCG ACTGGCCCGG CCTGCACGCG
CACCGGCTGT ACAACGAGTT CCTGATCGCG ATCGCGAGCC CCGACGCGGC CGGGCGCCGC
AAGGCCGGCC AGCGCACGCC GGCATGGGCG GTCGGGCAGA CGCTGCTCGG CGTGACGAGC
AATCAGCACG CGTGGGCGGA ATGGTTCTCG CACTTCGGCC TCGATCATCG CGAGATGCGG
ATCGGCCCGA GCTTCGAGCT GACGTCGCAT CTGATCCAGG CCGTGCGGGC CGGCATGGGG
ATCGGCCTCG TGCCGAAAGT GCTGGTGGAA GACGAACTGA GCCGCAACGA GCTCGTGTCG
ATCGGCGACG CGATCACCAG CCAGCGCAGC TACTACCTCG TGTACCCGCC CGAAAACGAC
ACGCTGCCGT CGCTGGTGGC GTTTCGGGAG TGGTTGCTGA AATCGTGCTG A
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| Protein sequence | MNYRRLTPSM SLLLVFEAAA RHESYTRAAD ELSLSQSAIS RQVQTLEDQL GVPLFRREGR
SVKLTEVGRR YFVELSGALG RIRGATLQAM SHQAGAGTLR LATLPTFGSK WLLPHLHDFY
AAHPGVTVHL HSRIGGIDFH TDDLDAAITV GAGDWPGLHA HRLYNEFLIA IASPDAAGRR
KAGQRTPAWA VGQTLLGVTS NQHAWAEWFS HFGLDHREMR IGPSFELTSH LIQAVRAGMG
IGLVPKVLVE DELSRNELVS IGDAITSQRS YYLVYPPEND TLPSLVAFRE WLLKSC
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