Gene BamMC406_5801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5801 
Symbol 
ID6182051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp332858 
End bp334042 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID641688936 
Producthypothetical protein 
Protein accessionYP_001815795 
Protein GI172065083 
COG category[R] General function prediction only 
COG ID[COG3970] Fumarylacetoacetate (FAA) hydrolase family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAT ATTCCAGCTA TCTTCCTGAC GATCTCGACG ATGCCCTGCT CGTTGGTCGC 
GTGTGGCGTC AAACGAAAAG CGGCGCGGGA CCGTGCGTCG TTGCCGTTAG CGGCGGGGAA
GTATTCGATA TCTCCCGCAT CGCACCGACC GTGTCCGACC TTTTCGAACG CGAGGATCTG
GTCGAATGCG TCCGGCAGGG TTCCAGCGAA CCTCTGGGTC ATGTCGGCAA TCTGATCGAA
GCCACAGTCG ACGCACAGCG AAAAGCGGAT CAACTCTACC TCCTGGCTCC CTGCGATCTG
CAAGCCATCA AAGCCTGTGG CGTGACGTTT GCCGTGAGCC TTCTTGAACG CGTCATCGAA
GAGCAGGCAG GCGGCGACCC TGCGAAGGCT GAGGAAGTGC GCGCTGCGAT CACGCGCCTG
ATCGGCACCG ATCTTTCGAA GATCAGGCCA GGCTCCGAAG CTGCCGTGAC GCTGAAGGAA
GAACTGCAGC GACGCGGTGC ATGGTCGCAG TACATGGAAG TCGGGATCGG CCCCGACGCC
GAGGTATTTT CGAAGTCGCA GCCCATGTCT TCGGTTGGAC TCGGCGCCGA TATCGGCTTG
CTGGCAGCTT CGAAGTGGAA TAACCCCGAG CCGGAGATCG TCCTGGCAGT CAACAGCAAA
GGCGAGGTGG TGGGCGCCAC ACTGGGTAAC GACGTCAATC TGCGCGACAT CGAGGGCCGG
TCCGCGCTGC TGCTAGGCAA ATGCAAGGAC AACAACGGCT CATGCGCGAT CGGTCCGTTT
ATCCGCCTGT TCGACGAACG GTTCACGCTG GACACGATTC GAGAAACGAG TGTTTCGCTG
CGCGTCGAAG GTACCGACGA CGGCTTCCTG CTCGAGGGCA TCAGCCATAT GCGGGAGATC
AGCCGTGACC CTCTTGACCT GGTGAATCAG ACCTGGGGCA AGCATCATCA GTATCCCGAT
GGTTTCATGT TGTTCCTCGG CACGATGTTC TCTCCGGTCG AGGATCGCGA TGCGCCGGGT
GGCGGCTTCA CGCATCACCT CGGGGACCGC GTCACGATCA GCGCTCCTTC GCTTGGCGCT
CTCGTCAACA CCGTGCGGCT GTCGACCGAA ATCGCTCCAT GGACATTCGG CGTGCGTGCG
CTGTACGCCA ACCTCGCCAA GCGCTCGCTG CTGAACCCGG GCTGA
 
Protein sequence
MTSYSSYLPD DLDDALLVGR VWRQTKSGAG PCVVAVSGGE VFDISRIAPT VSDLFEREDL 
VECVRQGSSE PLGHVGNLIE ATVDAQRKAD QLYLLAPCDL QAIKACGVTF AVSLLERVIE
EQAGGDPAKA EEVRAAITRL IGTDLSKIRP GSEAAVTLKE ELQRRGAWSQ YMEVGIGPDA
EVFSKSQPMS SVGLGADIGL LAASKWNNPE PEIVLAVNSK GEVVGATLGN DVNLRDIEGR
SALLLGKCKD NNGSCAIGPF IRLFDERFTL DTIRETSVSL RVEGTDDGFL LEGISHMREI
SRDPLDLVNQ TWGKHHQYPD GFMLFLGTMF SPVEDRDAPG GGFTHHLGDR VTISAPSLGA
LVNTVRLSTE IAPWTFGVRA LYANLAKRSL LNPG