Gene BamMC406_5786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5786 
Symbol 
ID6182531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp316091 
End bp317779 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content61% 
IMG OID641688922 
Producttannase and feruloyl esterase 
Protein accessionYP_001815781 
Protein GI172065069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC GGTTCAGCAC CCGCCGAAGC TCGGCTATTT TGAGTGCGCT ATTCGCAGCA 
TCAGCCGCTA CCGTATCGGG CTGCGGCGGC GACGACGCGG CGCCTGCAAA CGCCGCGGTC
GTGACGGCAG CCGCGAAGTG CAGTGCGTTG GCTGGCACGA CCGTTCCTGC CAGCTCGATC
GGGTTGCCGA CCACCGGTGC GACTGTCGTG TCCGCGACGC TTGTCGCCGA TACCGCTTCC
GGTAACCGCA ATGGTGAGTA CTGCAAAGTG CTTGGCACCA TTCACCCGGT CGATTTCAAC
GCACCCGATA TTCGGGCGGA GGTGGACCTT CCGACCAACT TCAACGGAAA AGCGGTCCAC
TTTGGCGGCG GCGGATTTGA CGGCACCATT GCCGATACCG AGGGTTCGCC CGCCGACGGG
TTCCTGGCGG GGGCAGAGCC CCCGGGCGTC AGCACGCCGT TGCGCAGGGG CTACGTAACG
ATGGGGAGCG ACAGCGGGCA TGAGGGAAAC GCGCTGGACG GTTCGTTTGC GGCAAACGAC
GAGGCCCTTG CCAACTACGC AGGCGACCAC ATCAAGAAGA CGCATGATTT CGCGGCCTTC
GTCGTAAAGG CACGATATGG CTCGGACTTC GTGCACAGTT ATTTCATTGG CGGCTCGAGT
GGCGGACGAC AAGGCTTGAT CGCCGCGCAA CGGTTCCCGC ACGACTACGA CGGCATCATC
TCCACCTTTC CCGCGTCGGG AATCACCGGG CTGTGGCTGC AGATGGGCAG AATCTCGCGA
TCTCTGCTGG CGCCCGGCGG ATACATCACG CCCGCCAAAG GCAAGGTCGT GCTCGCAGCG
GTCATCAAGC AATGCGACGC GCTTGACGGT GTGGCTGACG GCATTATCAG CAACCCTGCT
GCGTGCGTGT TCGATCCAGC GGCGATTCGC TGCTCGGGCG GCGGCGACAC CGGCGACAGT
TGCTTGTCGG ACGCGCAAAT CAATACGATG ACCACCGCTG GCACACCGCT CGACTTCAGC
TTCGATCTGG CAAACGGAAT TCACACCTTT CCGGGATATA ACGCATTCTC CGGAGCGGAC
TTTTGGTCGA CTCCGCTGGC TTGGGGCAGT TCCGCCGCCG ATGCGACGGT CGAGCCCGGG
GTCGTCGGCA AGACCGCATT CTTTTACGCG TTTCCAAATG ACATGCTCCG GTTCGCGGTC
GCTCGCGACG CTGCCGCCAG CATTCTGAAT TTCAATCCTG CGAACCCGGG CTCATTGACC
TCGCGCGTCC AGGCGGTGAG TGCGCTCATG GACAGCACCG GCACCGACTT GAGTCAATTC
CAGAGCCGCG GCGGGAAGAT CATTCTCCAG CACGGACAGT CAGACCAGTT CATCCCCGCG
CAATTGTCGA TCGATTACTA CAACAGGCTG GTATCCCGAT TCGGGCAAGG GCCACTGGGT
CAATTTCTGA AGTTCTACCT GGTTCCGGGT GCGGCCCACA GCTTCGGCGG ACAATTCAAT
GGTTCATATG ACGGTCTGAC AGCATTGGAC AACTGGGTGA CGAAAGGAAT CGCGCCCAAG
GATCTGACCA TCACCGACCT GACTCCGGCA ACAGCCGGAC GCACCCGGCC GCTGTGCGAA
TACCCGCAGT GGCCGAAATA CATCGGGGGC GATCAGAATC TGGCGACGAG CTTCTCGTGC
TCGAATTAA
 
Protein sequence
MRTRFSTRRS SAILSALFAA SAATVSGCGG DDAAPANAAV VTAAAKCSAL AGTTVPASSI 
GLPTTGATVV SATLVADTAS GNRNGEYCKV LGTIHPVDFN APDIRAEVDL PTNFNGKAVH
FGGGGFDGTI ADTEGSPADG FLAGAEPPGV STPLRRGYVT MGSDSGHEGN ALDGSFAAND
EALANYAGDH IKKTHDFAAF VVKARYGSDF VHSYFIGGSS GGRQGLIAAQ RFPHDYDGII
STFPASGITG LWLQMGRISR SLLAPGGYIT PAKGKVVLAA VIKQCDALDG VADGIISNPA
ACVFDPAAIR CSGGGDTGDS CLSDAQINTM TTAGTPLDFS FDLANGIHTF PGYNAFSGAD
FWSTPLAWGS SAADATVEPG VVGKTAFFYA FPNDMLRFAV ARDAAASILN FNPANPGSLT
SRVQAVSALM DSTGTDLSQF QSRGGKIILQ HGQSDQFIPA QLSIDYYNRL VSRFGQGPLG
QFLKFYLVPG AAHSFGGQFN GSYDGLTALD NWVTKGIAPK DLTITDLTPA TAGRTRPLCE
YPQWPKYIGG DQNLATSFSC SN