Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5783 |
Symbol | |
ID | 6182528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 312149 |
End bp | 312913 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641688919 |
Product | nitroreductase |
Protein accession | YP_001815778 |
Protein GI | 172065066 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGT GCAAAGCACC TTTCAATGTC GGTATCGAAA TGGACCGTCT CTCTCCTCCT CCGCTGGACT CGTTCGCCGA CGTGACCCGC GCCGTCGATT GGGCGCTCGT CACGCGGCGC AGCGTCCGTG CTTTCCTGTC CACGCCGGTT CCTCGCGAGC ACATCGAGGC CATCCTCGAC GTGGCTCGCT TCAGCGCAAC CGGCGTCAAC ATCCAGCCGT GGCATGTGCA TGTCGTGACA GGCGCGACGA AGTCCCGCCT GTCTGCCGCC ATCAACGAGA TCAATGACGA TCCCGACCGC AGCTCCGAGC TGGACGAGCC CTACGACTAC TACCCGCGCG AATGGATCGC ACCGTATGTG GATCGCCGGC GCGCGGTTGG CTGGAACCTG TATGGCTTGC TGGGCATCGA GAAGGGTGAC AAGGAGCGCA TGCATGTCCA GCACGGTCGC AACTACAGCT TCTTCGACGC ACCGGTGGGC CTGTTCTTCA CGGTTGACCG GGTCATGCGT GAAGGCAGTC TGCTCGACAC GGGGATGTTC CTGCAAAGCG TGATGATCGC CGCCCGGGCG CGCGGCCTCG ACACCTGCCC GCAGGCGGCT TTCAACAAGT TCCACCGCGT CATCGCCAAC GAACTGTCCA TTCCCGACAA CCAGATGTTG GTGTGCGGCA TGAGCCTCGG TTATGCGGAT CACGGCTGCA TCGAGAACAC GCTGGTCACG GAGCGCAGTC TGGTACGCGA TTTCACCACT TTTTATAATG AATGA
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Protein sequence | MAKCKAPFNV GIEMDRLSPP PLDSFADVTR AVDWALVTRR SVRAFLSTPV PREHIEAILD VARFSATGVN IQPWHVHVVT GATKSRLSAA INEINDDPDR SSELDEPYDY YPREWIAPYV DRRRAVGWNL YGLLGIEKGD KERMHVQHGR NYSFFDAPVG LFFTVDRVMR EGSLLDTGMF LQSVMIAARA RGLDTCPQAA FNKFHRVIAN ELSIPDNQML VCGMSLGYAD HGCIENTLVT ERSLVRDFTT FYNE
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