Gene BamMC406_5783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5783 
Symbol 
ID6182528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp312149 
End bp312913 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content61% 
IMG OID641688919 
Productnitroreductase 
Protein accessionYP_001815778 
Protein GI172065066 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT GCAAAGCACC TTTCAATGTC GGTATCGAAA TGGACCGTCT CTCTCCTCCT 
CCGCTGGACT CGTTCGCCGA CGTGACCCGC GCCGTCGATT GGGCGCTCGT CACGCGGCGC
AGCGTCCGTG CTTTCCTGTC CACGCCGGTT CCTCGCGAGC ACATCGAGGC CATCCTCGAC
GTGGCTCGCT TCAGCGCAAC CGGCGTCAAC ATCCAGCCGT GGCATGTGCA TGTCGTGACA
GGCGCGACGA AGTCCCGCCT GTCTGCCGCC ATCAACGAGA TCAATGACGA TCCCGACCGC
AGCTCCGAGC TGGACGAGCC CTACGACTAC TACCCGCGCG AATGGATCGC ACCGTATGTG
GATCGCCGGC GCGCGGTTGG CTGGAACCTG TATGGCTTGC TGGGCATCGA GAAGGGTGAC
AAGGAGCGCA TGCATGTCCA GCACGGTCGC AACTACAGCT TCTTCGACGC ACCGGTGGGC
CTGTTCTTCA CGGTTGACCG GGTCATGCGT GAAGGCAGTC TGCTCGACAC GGGGATGTTC
CTGCAAAGCG TGATGATCGC CGCCCGGGCG CGCGGCCTCG ACACCTGCCC GCAGGCGGCT
TTCAACAAGT TCCACCGCGT CATCGCCAAC GAACTGTCCA TTCCCGACAA CCAGATGTTG
GTGTGCGGCA TGAGCCTCGG TTATGCGGAT CACGGCTGCA TCGAGAACAC GCTGGTCACG
GAGCGCAGTC TGGTACGCGA TTTCACCACT TTTTATAATG AATGA
 
Protein sequence
MAKCKAPFNV GIEMDRLSPP PLDSFADVTR AVDWALVTRR SVRAFLSTPV PREHIEAILD 
VARFSATGVN IQPWHVHVVT GATKSRLSAA INEINDDPDR SSELDEPYDY YPREWIAPYV
DRRRAVGWNL YGLLGIEKGD KERMHVQHGR NYSFFDAPVG LFFTVDRVMR EGSLLDTGMF
LQSVMIAARA RGLDTCPQAA FNKFHRVIAN ELSIPDNQML VCGMSLGYAD HGCIENTLVT
ERSLVRDFTT FYNE