Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5782 |
Symbol | |
ID | 6182527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 310482 |
End bp | 312134 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641688918 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001815777 |
Protein GI | 172065065 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAA CGGCCTATTC TCGAGGTCTT GAGAAGAACG CGGCAAACCA CGTTCCATTG ACGCCCCTGA CCTTTCTCGA TCGAACCGCC GACGTCTTTC CGAATCGCAC CGCGATCATT CATGGCGACT TCCGACAGAC GTGGGCGAAA ACGCGCGAGC GTTGCTATCG CTTCGCATCG GCGCTCGTTC GGATGGGGAT CGAGCCGGGC GACACGGTGT CGATCATCGC GCCGAACACC CCGGCCATGC TCGAGGCCCA CTTCGGCGTT CCGCTGTCGG GCGCCGTTCT CAATGCAATC AATTGCCGCC TCGATGCCGA CGGCATCGCA TTCATCCTGC GCCACGGCGA ATGCAAGCTG CTGCTCGTGG ATCGCGAACT GGCGCCTCTG GTCAAGAAAG CGCTGCAGTC GGTTCCCAAC CCGCCGCGCG TGATCGACAT CAATGACCAC GAGGCACCCG ACGGCCCGGC CATCGGCGAA ACCGATTATG AGTCGCTGCT GGCGAGCGGC GATCCGGAAT TTGCAGGCCG CCGCCCGGCC GACGAGTGGA CACCGATCGC GTTGAACTAC ACGTCGGGCA CCACCGGGGA TCCGAAAGGC GTCGTGCCGA GCCATCGTGG CACCTATGTG ATGAGCCTGT TGCAAATGAC GAACTGGCCG CTCCCGCGTG CGCCGATCTA CCTGTGGACG CTTCCCATGT TCCACGCGAA CGGCTGGTGC TTCACGTGGG CGATTACGGC AGCGGCGGGC ACGCATGTCT GTTTGCGCAA GGTGAATGCC GCGAATATTC TCTCTGCCAT CGCCAAGCAC GGCGTCGATC ATTTTTGTGC GGCACCCATT GTCCTCGCCG GTATCGCGAG CGTGCCGCCG TCGGAGCTGC AGCCGTTGCC TCGTCGTGTG CGGGTCCTGA CCGCCGGCTC GCCGGCGCCG GCGGCGGTGC TCGAGGCCGC CGGCGCGATG GGTTTCGACG TCGACCACGT CTATGGCATT ACCGAAATCG CCGGCACGCC GATCAGCTGT GCATGGCACG ACGAGTGGGA TACGTTGGCG CCGGACCAGC AAGGGAGAAT GAAAGCGCGA CAAGGTGTAC GCGCGGCGGC GTTCGAGAAC ATGTCGGTCG CCGATCTCGC GACGCTCGAA CCCGTCCCCG TCGATAGCAC GTCTTGCGGC GAAGTGCTGG TCCGCGGGAA TACGGTCATG ATGGGGTACT TCAAGAATGC CGACGCAACG GCAAAAGCTT TCGCGGGCGG CTGGTTTCAC ACCGGCGATC TTGCGGTCGT GCATCCCGAC GGCTATATCC AGATCACCGA CCGCTCGAAG GACGTCATCA TCTCGGGTGG AGAAAACATT TCGTCCGTGG AAGTGGAGGA GGTCATTTAT CGCATGGCAG GCGTGCTCAA CGCGGCCGTG GTCGCTCAGC CGGATGACAA ATGGGGCGAG ACGCCTTGTG CGTTCATCGA ACTGAAACCG GATGCCTCCC CCATCACCGA GCAGGATGTG ATCCTGTTCT GCCGCGAGCG ACTGGCGCAT TTCAAATGCC CGCGTCGTGT GATTTTCGGC GAGTTGCCCA AGACCGCCAC AGGCAAGATC CAGAAGTTCC GTCTTCGGGA GCAAGCGGGC AGCCAGGCCG CGATCACGAG GTTGGCGGGA TAG
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Protein sequence | MSATAYSRGL EKNAANHVPL TPLTFLDRTA DVFPNRTAII HGDFRQTWAK TRERCYRFAS ALVRMGIEPG DTVSIIAPNT PAMLEAHFGV PLSGAVLNAI NCRLDADGIA FILRHGECKL LLVDRELAPL VKKALQSVPN PPRVIDINDH EAPDGPAIGE TDYESLLASG DPEFAGRRPA DEWTPIALNY TSGTTGDPKG VVPSHRGTYV MSLLQMTNWP LPRAPIYLWT LPMFHANGWC FTWAITAAAG THVCLRKVNA ANILSAIAKH GVDHFCAAPI VLAGIASVPP SELQPLPRRV RVLTAGSPAP AAVLEAAGAM GFDVDHVYGI TEIAGTPISC AWHDEWDTLA PDQQGRMKAR QGVRAAAFEN MSVADLATLE PVPVDSTSCG EVLVRGNTVM MGYFKNADAT AKAFAGGWFH TGDLAVVHPD GYIQITDRSK DVIISGGENI SSVEVEEVIY RMAGVLNAAV VAQPDDKWGE TPCAFIELKP DASPITEQDV ILFCRERLAH FKCPRRVIFG ELPKTATGKI QKFRLREQAG SQAAITRLAG
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