Gene BamMC406_5778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5778 
Symbol 
ID6182523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp305713 
End bp306183 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID641688914 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001815773 
Protein GI172065061 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0285985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAAGC TCGACCGATA CGACCTGGCG ATCCTGCGCA TCCTCGAACG CGACGGACGC 
ATCACGAAGT CGAAGCTCGC GGAGGCGGTG AACCTGTCGA TCTCGCCGGC GTGGGAGCGC
GTGCGCAAGC TCGAGGAAAG CGGCGTGATC CGCGGCTATC GCGCGGACGT CGACTGGATC
GGTACGTTTT CGGGCAGTCG CATCGTCGTC GAGGTGACGC TGTCGCGGCA TACCGCGCCC
GACATGCGGC GCTTCGAGGA TCGCGTGAGC GCGGCGCCCG AGGTCGCGCA GTGTTTCGCG
ACGGGCGGCG GCGTCGACTA CGTGCTGCAC GTGGTCGCGC GCGACATCGA TCACTACCAG
CGCTTCATCG ATGCGTTGCT GATGGACGAC CTCGGCATCG AACGCTACTT CACGTACATC
GTGACGAAGG TCGTGAAGTG CGAATCGGGC GGCGCGCCGG ACTGGCACTG A
 
Protein sequence
MIKLDRYDLA ILRILERDGR ITKSKLAEAV NLSISPAWER VRKLEESGVI RGYRADVDWI 
GTFSGSRIVV EVTLSRHTAP DMRRFEDRVS AAPEVAQCFA TGGGVDYVLH VVARDIDHYQ
RFIDALLMDD LGIERYFTYI VTKVVKCESG GAPDWH