Gene BamMC406_5777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5777 
Symbol 
ID6182522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp304674 
End bp305699 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID641688913 
Productectoine utilization protein EutE 
Protein accessionYP_001815772 
Protein GI172065060 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID[TIGR02994] ectoine utilization protein EutE 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0434759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCTT CTCCGATCAC GCCGACCGTC GACTTCGACG CGGACGGCGA ACAACATGGC 
TTTCTGAAGC TGCCTTACTC GCGCGACGAT TCCGCGTGGG GGGCGATCAT GATTCCGGTG
ACCGTCGTGA AGCGCGGCGA CGGGCCGACG GTGTTGCTGA CCGGCGGCAA TCACGGCGAC
GAATACGAAG GGCCGGTCGC GCTGTCGAAG CTCGCCGGTT CGCTGAAGGC GGCCGACGTG
ACCGGCCGCG TGATCGTCGT GCCGTTCATG AACTACCCGG CATTCCGCGC CGGTTGCCGT
ACGTCGCCGA TCGATTCGGG CAACCTGAAC CGCAGTTTTC CGGGGCGCCC GGATGGCACC
GTCACCGAGA AGATCGCAGA TTACTTCCAG CGTCATCTGT TGCCGCTCGC GACGCACGTG
CTCGACATCC ATGCGGGCGG CCGCACGCTC GACTTCGTGC CGTTCGCGGC GATCCACGTG
CTGGACGATC GCGACCAGCA GGCACGCTGC GATCGCGCGA TGCGCGCATT CGGCGCGCCG
TACTCGATGC GCATGCTGGA GCTCGACAGC GTGGGACTCT TCGACAGCGC AGCCGAGGCG
GCCGGCAAGG TGTTCGTGTC GACCGAGCTG GGCGGCGGCG GATCGTCGAC GGCGGCGAGC
GTCGCGATCG CCGAGCGCGG CGTGCGCGGG TTTCTCGCGC ATGCGGGCGT GATCGCGAAG
GGCGACGGCG CACGCGCCGC ACCGCGCACG ACCACGCTGC TCGACATGCC GGACGGCTCG
TGCTTCACGA CCAGCGAGCA TCGCGGGCTG CTCGAGATGT GCCGCGACCT CGGCAGCGAG
GTCGACGCGG GCGACGTGCT CGCACGCGTA CACGACATCG ACCGCACGGG CGTTGCGCCG
GTCGAATACG TCGCGCGCCG GCGCGGCCTG CTCGCGGCCC GGCACTTCCC GGGCATCGTG
CAGGCCGGCG ACACGATCGC GGTGGTCGCC GACATCGTCG AGCGCAACAT TCCGGTGGCC
GCATAG
 
Protein sequence
MRASPITPTV DFDADGEQHG FLKLPYSRDD SAWGAIMIPV TVVKRGDGPT VLLTGGNHGD 
EYEGPVALSK LAGSLKAADV TGRVIVVPFM NYPAFRAGCR TSPIDSGNLN RSFPGRPDGT
VTEKIADYFQ RHLLPLATHV LDIHAGGRTL DFVPFAAIHV LDDRDQQARC DRAMRAFGAP
YSMRMLELDS VGLFDSAAEA AGKVFVSTEL GGGGSSTAAS VAIAERGVRG FLAHAGVIAK
GDGARAAPRT TTLLDMPDGS CFTTSEHRGL LEMCRDLGSE VDAGDVLARV HDIDRTGVAP
VEYVARRRGL LAARHFPGIV QAGDTIAVVA DIVERNIPVA A