| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5772 |
|---|
| Symbol | |
|---|
| ID | 6182517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 299067 |
|---|
| End bp | 299546 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641688908 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001815767 |
|---|
| Protein GI | 172065055 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.94508 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC TGCACGATCT TCGCCTCGCC GTCAGCAGCC TGCTGGTGCT CACCGCGCGC
AAGTGGCGCC GCACGAGCGA CGCCGTGCTG ACCGCGTACA ACGTGTCCGA AGCCTGCGCG
ACGCCGCTGC TGATCGCCGG CCGCCTCGGC GAAGGCGTGC GCCAGGGCAC GCTCGCCGAG
CACGTCGGCA TCGAGGGGCC GTCGCTCGTG CGCCTGCTCG ACCAGCTTTG CGCGGCCGGC
CTCGCACGCC GCGACGAGGA TCCGCACGAC CGCCGCGCGA AGACGATTTC GCTGACGGCC
GCCGGCCGCG CGGTCACCGC GAAGATGGAA GAAGACCTTC GCGTGCTGCG CGCGCAGGTG
CTCAAGGGCG TCACGCGCGC CGATCTCGAA GCGACGCTGC GCGTCCTGAA CGCATTCGGC
GCGGCCGATG CGCAGCACCC GGCGTCACGT CCGTCCCATC CCGCCGATTC CGCGTCATGA
|
|---|
| Protein sequence | MTNLHDLRLA VSSLLVLTAR KWRRTSDAVL TAYNVSEACA TPLLIAGRLG EGVRQGTLAE
HVGIEGPSLV RLLDQLCAAG LARRDEDPHD RRAKTISLTA AGRAVTAKME EDLRVLRAQV
LKGVTRADLE ATLRVLNAFG AADAQHPASR PSHPADSAS
|
|---|
| |