Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5760 |
Symbol | |
ID | 6181877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 287751 |
End bp | 288377 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641688896 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001815755 |
Protein GI | 172065043 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.327742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.559912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC GAAAGCGCGC GGCAATTCTC GCCGCGGCGA TCGAGGAATT TCGCGCGGCG GGCTACGACG CGACCAGCAT GGATCGCATC GCCGCGCGCG CGGACGTGTC GAAGCGCACC GTCTACAACC ACTTCCCCGG CAAGGAAGCA TTGTTCGCAG CGATCCTGCA CCAGCTGTGG GACGCGACGC TGACCGCCGG CGCGCCGGCC TATTGCGCCG ACGTGCCGCT GCGGGATCAG TTGCTCGCAC TGCTGGAGCG CAAATTGCGG TTATTGAACG ACGAAGCGTT TCTCGCGCTC GCTCGCGTCG CGATCGGCGC GGCCATCCAC TCGCCGGAAC GCGCGCGCGA CATGGTCGAA CGCATGGGCG AGCGCGAAGA GGACGTGACG GTATGGATTC GTGCGGCCGC GGCGGCCGGC CGGTTGGCGG CGACCGATCC CGTATTCGCC GCACATCAGC TGCACGGGCT CGTGAAAGCG TTCGCGTTCT GGCCGCAGGT GACGATGGGC CAGCCGCCGC TGGGCGCGCA GGAACAGCAG AAGGTCGCGG AAACGGCCGC CGACATGTTT CTTGCGTACT ACGCGTGTCC AGATCACGAT GGGGAGTGCG GTGCAGGGCA GGGCTGA
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Protein sequence | MTDRKRAAIL AAAIEEFRAA GYDATSMDRI AARADVSKRT VYNHFPGKEA LFAAILHQLW DATLTAGAPA YCADVPLRDQ LLALLERKLR LLNDEAFLAL ARVAIGAAIH SPERARDMVE RMGEREEDVT VWIRAAAAAG RLAATDPVFA AHQLHGLVKA FAFWPQVTMG QPPLGAQEQQ KVAETAADMF LAYYACPDHD GECGAGQG
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