Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5756 |
Symbol | |
ID | 6181873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 281473 |
End bp | 282789 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641688892 |
Product | hypothetical protein |
Protein accession | YP_001815751 |
Protein GI | 172065039 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5527] Protein involved in initiation of plasmid replication |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.693457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.849034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTA AGCCCGCAAT CAAAGGCTCC GACAAGCAGG TTTCGCTATT TCAGACGCCC GAGCCTCCCG ATCTGCTGCG CAAGGCGGTC CAGGCAATTC ATATCGCTCC GAAGTCCGGA AAGATCGGTC TCCAGCAGCG CAAGATGTTC AGCTCGCTGA TCAAGAACGC CCTTCGTCAG GAAGCGTTCG AACCCGGCCG GACGAGCTTC TCGATCTCGA TCGCGGCGCT CTCGCACGAG AGCGGGTTGA ACAGCAACAA CACGAAGTAC GTGAAGGACA CGGTCAACTC GTTGATCAGT ACCGTCGTCA ACTGGGACTA CCTTGCCGCG GACCGCTCGA CGGTGTGGAA GGCGTCGGGC CTGCTCGCCG GCGCCGAGCT CGAGCAATCG GTGCTGAAGT ACAGCTTCTC CGACCAGATT CGCAGCGAGC TGCTCAATCC GGAAATCTAC GCGCTCATCG ATATGCGGAT CGCGCGCGAG TTTCGGCGCT CGCACTCGCT CGCGCTGTGG GAGAACACGG TGCGCTACGA AGGGATCGGC ATCACGGCGA AGATTCCGCT GCCGAAATTC CGCGACCTCA TTCTCGGTCA GGACAAGGCA TCGCAGTCGT ACAAGGAGTA CAAGCTCTTC AAGAGCAAGG TCCTGGTGCC GTGCATTCAG GAGGTGAACG AAGTTTCCGA CCACACGCTC GAGCTGATCG AACACAAGTC GGGTCGCAGC GTGGAGGCCG TGCAGTTCAA GGTGACGCGC AAGCAGAGCG CGGATACGGT CGAAGAAGGC GATGTCAAGA ACGAAGCGCT CGTCGACGAG GTCGCGAAGT TCGGCATCCC GCGTTCGGAA GCGCGCCGGT TGATCACGCA GTACGGCGTG CAGCGCATCA AGGCGGCAAT CGCCTACACG CTCAATCGGA CTACGAAGAA GAACGCGGCA CCGATCGACA ACGTGGCCGC GTATTTCCGC AAGGCGCTGA CGCACGGCTA TACGCTGGCT GACGGGCAGG GGACCGAAAC GGCCGCCCCG GCGAAGGAAT CCGCGCAGAG CAAGCAGGAA CAGATTCGCG ACAAATACCT GGCCGCGAAG GTCGACGAAG CGGGGGCGTA TTTCCGCGAA CTGGAGATCG ACGACCAGAC CAAGCTGATC GAGCGCTACA ACGAGACGGT GGCCGGTTCG AAGGATCTCA CGCTATCGCC GAAGAAGAAG GCGAGCAAGC TGGCGCAAAC CAGTTTCTTC CGGTGGCTGG CGCTCGACAC CTGGGGCGAA CCGACCTCGG ACGACTTGCT GGAATTCCTG CTGAAAAGCA GCCTCGCGAC CAACTGA
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Protein sequence | MPRKPAIKGS DKQVSLFQTP EPPDLLRKAV QAIHIAPKSG KIGLQQRKMF SSLIKNALRQ EAFEPGRTSF SISIAALSHE SGLNSNNTKY VKDTVNSLIS TVVNWDYLAA DRSTVWKASG LLAGAELEQS VLKYSFSDQI RSELLNPEIY ALIDMRIARE FRRSHSLALW ENTVRYEGIG ITAKIPLPKF RDLILGQDKA SQSYKEYKLF KSKVLVPCIQ EVNEVSDHTL ELIEHKSGRS VEAVQFKVTR KQSADTVEEG DVKNEALVDE VAKFGIPRSE ARRLITQYGV QRIKAAIAYT LNRTTKKNAA PIDNVAAYFR KALTHGYTLA DGQGTETAAP AKESAQSKQE QIRDKYLAAK VDEAGAYFRE LEIDDQTKLI ERYNETVAGS KDLTLSPKKK ASKLAQTSFF RWLALDTWGE PTSDDLLEFL LKSSLATN
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