Gene BamMC406_5756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5756 
Symbol 
ID6181873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp281473 
End bp282789 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content61% 
IMG OID641688892 
Producthypothetical protein 
Protein accessionYP_001815751 
Protein GI172065039 
COG category[L] Replication, recombination and repair 
COG ID[COG5527] Protein involved in initiation of plasmid replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.693457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.849034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTA AGCCCGCAAT CAAAGGCTCC GACAAGCAGG TTTCGCTATT TCAGACGCCC 
GAGCCTCCCG ATCTGCTGCG CAAGGCGGTC CAGGCAATTC ATATCGCTCC GAAGTCCGGA
AAGATCGGTC TCCAGCAGCG CAAGATGTTC AGCTCGCTGA TCAAGAACGC CCTTCGTCAG
GAAGCGTTCG AACCCGGCCG GACGAGCTTC TCGATCTCGA TCGCGGCGCT CTCGCACGAG
AGCGGGTTGA ACAGCAACAA CACGAAGTAC GTGAAGGACA CGGTCAACTC GTTGATCAGT
ACCGTCGTCA ACTGGGACTA CCTTGCCGCG GACCGCTCGA CGGTGTGGAA GGCGTCGGGC
CTGCTCGCCG GCGCCGAGCT CGAGCAATCG GTGCTGAAGT ACAGCTTCTC CGACCAGATT
CGCAGCGAGC TGCTCAATCC GGAAATCTAC GCGCTCATCG ATATGCGGAT CGCGCGCGAG
TTTCGGCGCT CGCACTCGCT CGCGCTGTGG GAGAACACGG TGCGCTACGA AGGGATCGGC
ATCACGGCGA AGATTCCGCT GCCGAAATTC CGCGACCTCA TTCTCGGTCA GGACAAGGCA
TCGCAGTCGT ACAAGGAGTA CAAGCTCTTC AAGAGCAAGG TCCTGGTGCC GTGCATTCAG
GAGGTGAACG AAGTTTCCGA CCACACGCTC GAGCTGATCG AACACAAGTC GGGTCGCAGC
GTGGAGGCCG TGCAGTTCAA GGTGACGCGC AAGCAGAGCG CGGATACGGT CGAAGAAGGC
GATGTCAAGA ACGAAGCGCT CGTCGACGAG GTCGCGAAGT TCGGCATCCC GCGTTCGGAA
GCGCGCCGGT TGATCACGCA GTACGGCGTG CAGCGCATCA AGGCGGCAAT CGCCTACACG
CTCAATCGGA CTACGAAGAA GAACGCGGCA CCGATCGACA ACGTGGCCGC GTATTTCCGC
AAGGCGCTGA CGCACGGCTA TACGCTGGCT GACGGGCAGG GGACCGAAAC GGCCGCCCCG
GCGAAGGAAT CCGCGCAGAG CAAGCAGGAA CAGATTCGCG ACAAATACCT GGCCGCGAAG
GTCGACGAAG CGGGGGCGTA TTTCCGCGAA CTGGAGATCG ACGACCAGAC CAAGCTGATC
GAGCGCTACA ACGAGACGGT GGCCGGTTCG AAGGATCTCA CGCTATCGCC GAAGAAGAAG
GCGAGCAAGC TGGCGCAAAC CAGTTTCTTC CGGTGGCTGG CGCTCGACAC CTGGGGCGAA
CCGACCTCGG ACGACTTGCT GGAATTCCTG CTGAAAAGCA GCCTCGCGAC CAACTGA
 
Protein sequence
MPRKPAIKGS DKQVSLFQTP EPPDLLRKAV QAIHIAPKSG KIGLQQRKMF SSLIKNALRQ 
EAFEPGRTSF SISIAALSHE SGLNSNNTKY VKDTVNSLIS TVVNWDYLAA DRSTVWKASG
LLAGAELEQS VLKYSFSDQI RSELLNPEIY ALIDMRIARE FRRSHSLALW ENTVRYEGIG
ITAKIPLPKF RDLILGQDKA SQSYKEYKLF KSKVLVPCIQ EVNEVSDHTL ELIEHKSGRS
VEAVQFKVTR KQSADTVEEG DVKNEALVDE VAKFGIPRSE ARRLITQYGV QRIKAAIAYT
LNRTTKKNAA PIDNVAAYFR KALTHGYTLA DGQGTETAAP AKESAQSKQE QIRDKYLAAK
VDEAGAYFRE LEIDDQTKLI ERYNETVAGS KDLTLSPKKK ASKLAQTSFF RWLALDTWGE
PTSDDLLEFL LKSSLATN