| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5751 |
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| Symbol | |
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| ID | 6181868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 273706 |
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| End bp | 274677 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641688887 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001815746 |
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| Protein GI | 172065034 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.602642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.616352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATC GACTATCCAG ATCCCGCCGC CGGCTCATCC AGGCCGGTCT GGCGCTCACT
GCCGGCGCTG CCGCCCAGCC GCGCTTCGCG CTCGCTGCCG CGGCCGGCGC ACGCACGTTG
CGCATCGGCT ATCAGAAAGG GCCGCTCAGC CTGCTGAAGG CGAGAGGCAC GCTGCAGGAC
AAGCTCGCGA CGCTCGGTGT GAACGTGACA TGGACCGAGT TCCCGTCGGG GCCGCCGCAG
CTCGAAGCGC TCAATGCGGG GTCGATCGAC TTCGGCGATG TCGGCGAGGC GCCGCCGATT
TTTGCGCTCG CCGCGGGTGC GCCGCTCGTC TACTACGCGC AGACGCCGGC AGGACCCTCG
ACCGAGGCCG TGGTCGTCGC GAAGGATTCG CCGGTCAGGA CCTTCGCGGA TCTGCGCGGC
AAGCGCGTCG CGCTCGTGAA GGGATCCAAC ACGCACTTCC TGCTGGTCCG CTTGCTGCAG
GCCGCGAAGC TCGACTTTGC GGACGTCAAG CCGGTCTGGC TGTCTCCGTC CGATGCGCGC
GCCGCGTTCG AGAACCGCTC GGTCGATGCG TGGATCATCT GGGATCCGTT TCTCGCCGTC
GTCCAGCAGA CGTTGGGCGC GCGCATCGTC GCGGATGGCA CGGGGCTCGT CGAGAACCGC
AGCTACTACT TCGCGTCGCG CACCTATGCG CAGCGCAATG CCGACGTGCT GGGTGTGGCC
GTGTCCGAGC TGACGACGGT CCAGCGATGG CTCGATGCGA ATCGCCCGCA GGGTGCGGCC
GAGTTCTCGA AACTGTGGGG CATTCCGGAG CCGGCCGTGG CACTCGCGTT CCGCCGTGCG
CGCTTCGGCG TCGAACCCGT GACGCGCGAG ACGCTCGCGT ACCAGCAGCA CATCGCGGAC
GTGTTCTATC AGGCGGGTAT CCTGCCGAAA CGCGTGGACG TCAGCGCGGC GGCGCCGCCC
ACGCTCGCAT GA
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| Protein sequence | MADRLSRSRR RLIQAGLALT AGAAAQPRFA LAAAAGARTL RIGYQKGPLS LLKARGTLQD
KLATLGVNVT WTEFPSGPPQ LEALNAGSID FGDVGEAPPI FALAAGAPLV YYAQTPAGPS
TEAVVVAKDS PVRTFADLRG KRVALVKGSN THFLLVRLLQ AAKLDFADVK PVWLSPSDAR
AAFENRSVDA WIIWDPFLAV VQQTLGARIV ADGTGLVENR SYYFASRTYA QRNADVLGVA
VSELTTVQRW LDANRPQGAA EFSKLWGIPE PAVALAFRRA RFGVEPVTRE TLAYQQHIAD
VFYQAGILPK RVDVSAAAPP TLA
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