Gene BamMC406_5746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5746 
Symbol 
ID6181863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp269233 
End bp269688 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID641688882 
Producthypothetical protein 
Protein accessionYP_001815741 
Protein GI172065029 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.360533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.553676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TCGCGTTCCA CCCTTCGGGC GTCGCGCACC CGCGCCAGGC CGAATTCACG 
ATACTCGAGC AACTGCTCGC GATTCGCGTG CGCTCGGGCG CCGATCTCGC CGAGCTGGCG
AGCGCGCGCG TCGACGTCGC GGTGATCGAT CGCCTGTCGG AGCGCGGCCT GAAGTCGGAC
GAACTCGCCT TCATCATCCC GCGACGCACG TTGAGCCATC GCCGCCAGGC GCACGAGCGC
CTGTCGCCGG AGGAATCCGA CAAGGCGATC CGGCTTGCGC GCATCGTCGC GCAGGCGACG
GCCACGTTCG GCGACCAGGA CAAGGCGATG GCGTGGCTGC GCAACGGGCT CCAGCGCTTC
GGCGGCCGCA CGTCGCTCGA CATGTCGAGC ACCGAGCACG GCGCGCGACT CGTCGAAGAG
GCGCTCACGC AGATCGACGA AGGGTATTTC GCTTGA
 
Protein sequence
MSTIAFHPSG VAHPRQAEFT ILEQLLAIRV RSGADLAELA SARVDVAVID RLSERGLKSD 
ELAFIIPRRT LSHRRQAHER LSPEESDKAI RLARIVAQAT ATFGDQDKAM AWLRNGLQRF
GGRTSLDMSS TEHGARLVEE ALTQIDEGYF A