Gene BamMC406_5745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5745 
Symbol 
ID6181862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp268757 
End bp269236 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID641688881 
ProductRES domain-containing protein 
Protein accessionYP_001815740 
Protein GI172065028 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0935978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.72547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACGC TGTGGCGGAT CAGCAATTAC GCCGATCTGA AAGGCATCGG TGGCTTGCGG 
GCCGGCGGGC GCTGGCATTT TGCCGGGCAG CCCGTCGTCT ATCTCGCCGA GCATCCGGCG
CTCGCGCTGC TCGAGACGCT CGTCCACTTC GAAATGGCCA CCGTCGCGCA ATTGCCGAGC
GGATACCAGT TGCTGCGCGT CGAGGTGTCC GAATCGGTGG ACGTTGCCGA GATCGCGGAA
GGCGATGCGC CGGCCGACTG GCGGGAGAAC ATCGACTGGA CTCGCAGCGC CGGCACCGAG
TGGCTGCACA CGCAGCCGAG CGCACTGCTG CGCGTACCGA GCGTCGTCGT GCCGCACGCG
CACAACTTCC TGTTGAATCC GCTGCACCCG GCCGCATCCG ACGTCCGCAT CGCGGAAGTC
ATGCAGTCGC CGTACGACAG CCGGATTCTG CGGCTGGTCC AGTCGAACAA GAGCGAATAG
 
Protein sequence
MTTLWRISNY ADLKGIGGLR AGGRWHFAGQ PVVYLAEHPA LALLETLVHF EMATVAQLPS 
GYQLLRVEVS ESVDVAEIAE GDAPADWREN IDWTRSAGTE WLHTQPSALL RVPSVVVPHA
HNFLLNPLHP AASDVRIAEV MQSPYDSRIL RLVQSNKSE