Gene BamMC406_5743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5743 
Symbol 
ID6181860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp266259 
End bp267740 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content70% 
IMG OID641688879 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001815738 
Protein GI172065026 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0671163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.699165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG GTCGATCGCT TGGCGCGACG CTCGCGCTCG CGTTCGGGGC GACGATGCTC 
GCGGTCTTCG CGCTCGTCGG CACGTACGTG TATACCGGCC TCGAGCGGCA GGTGAGGACG
CAGGACGATC TGGACATCGT GCTTGCCGCT CGACACACGC GCCGGCTCGC GGGCGAACTC
GATTCGCTCG ACGCCGTGCG CGCGCACGCG GACCGGCTGA CGAGCCAGGT GCTCGGCAAC
ACGGCACTGT CGATGGCCGT GGTCGACGAG CGGGGCAACG TGCTCGCGCG GCACAACGTC
AAGCGGACCG AGCGCGAGGA TCTGCCGCCG GCTGCGTCGG GCACGGCGTC GCCCGCACCG
CCTGCGTTGC CCGATGCCGA GCTGTTTCCG CGCCACGCGA CGCCGGTGCC GGCGGCAGAA
CGGATCACGG TCGACCGGAT CGCGACATGG AGTGCCGACG GCGGCACGCC CGTGCGCGGT
GTCGTTGCCG GCGCGATGCT GCGCGACGGT ACGCAGATCC GCATCGCGAT CGCGCGCGAC
ATGAGCGATC GCGCCGAACT GCTCGACGGC TATCGCGACA AGCTGAAGCT CGCCGGCGGG
CTCGGCGCGC TGTGCGCGAT GCTGCTCAGC TACTGGCTGA TCCGCACGGC GCTCGCACCG
CTGCGCGAGA TCGTCGCGAA CACCGGCCGG ATCACCGTCG ACAAGCTCGA CGCGCGGCTC
GATGCCGCGC GCGCGCCGCG CGAACTGCGC GCGCTCGTCG ATGCGCAGAA CGCGATGCTC
GGCCGCCTGC AGCAAGCTTT CGGACATCTG TCGCAATTCA GCGCCGATCT CGCGCACGAC
CTGCGCACGC CGCTGAACAA CATGCGCGGC GCGACCGAGG TGGCGCTTGC GCGGCCGCGT
TCGCCCGGCG AATACCAGGC GCTGCTCGAA TCGAATCTCG AGGAATACGA CCGTCTCGCG
CGGATGATCG AGAACGTGCT GTTTCTCGCG CGCGCCGAAC ACCCGACCTT CGTGACGCGG
CAGCGCGCAT TTGACGTGCA CGACGAGCTG ACGCGCATCG CCGAATACTT CGAAGGGCTC
GCCGATGAAG CGGGTTCGAC GCTGCGTGTT GACGGGCACG GCCAGCTGAC TGCCGATGTC
GAATTGTTTC GCCGCGCGGT CGGCAACCTG CTCGCGAACG CGCTGCGCTA TACGCCTGCG
GGTGGTGTCA TCGCGCTGAG CGTCGACGAA ACGGCGGACG CGGTACGCGT CGTCGTCGAG
AATCCGGGCG AGCCGATCGA TCCCGCGCTG CTGCCGCGCA TCTTCGATCG GTTCGTGCGC
GGCGACCCCG CGCGCAGCGG CGGCGTGCCG GGCGGCACGG CCGGGCTCGG GCTCGCGATC
GTGCGCTCGG TGATGGAGCT GCACGGCGGC ACCGCGCGCG TCGAAAGCGA TGCGGCGGGC
ACGCGGTTCA TCCTCATCTT CGTCAGGAAT CCTGCGTCTT GA
 
Protein sequence
MTLGRSLGAT LALAFGATML AVFALVGTYV YTGLERQVRT QDDLDIVLAA RHTRRLAGEL 
DSLDAVRAHA DRLTSQVLGN TALSMAVVDE RGNVLARHNV KRTEREDLPP AASGTASPAP
PALPDAELFP RHATPVPAAE RITVDRIATW SADGGTPVRG VVAGAMLRDG TQIRIAIARD
MSDRAELLDG YRDKLKLAGG LGALCAMLLS YWLIRTALAP LREIVANTGR ITVDKLDARL
DAARAPRELR ALVDAQNAML GRLQQAFGHL SQFSADLAHD LRTPLNNMRG ATEVALARPR
SPGEYQALLE SNLEEYDRLA RMIENVLFLA RAEHPTFVTR QRAFDVHDEL TRIAEYFEGL
ADEAGSTLRV DGHGQLTADV ELFRRAVGNL LANALRYTPA GGVIALSVDE TADAVRVVVE
NPGEPIDPAL LPRIFDRFVR GDPARSGGVP GGTAGLGLAI VRSVMELHGG TARVESDAAG
TRFILIFVRN PAS