Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5743 |
Symbol | |
ID | 6181860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 266259 |
End bp | 267740 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641688879 |
Product | heavy metal sensor signal transduction histidine kinase |
Protein accession | YP_001815738 |
Protein GI | 172065026 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0671163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.699165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG GTCGATCGCT TGGCGCGACG CTCGCGCTCG CGTTCGGGGC GACGATGCTC GCGGTCTTCG CGCTCGTCGG CACGTACGTG TATACCGGCC TCGAGCGGCA GGTGAGGACG CAGGACGATC TGGACATCGT GCTTGCCGCT CGACACACGC GCCGGCTCGC GGGCGAACTC GATTCGCTCG ACGCCGTGCG CGCGCACGCG GACCGGCTGA CGAGCCAGGT GCTCGGCAAC ACGGCACTGT CGATGGCCGT GGTCGACGAG CGGGGCAACG TGCTCGCGCG GCACAACGTC AAGCGGACCG AGCGCGAGGA TCTGCCGCCG GCTGCGTCGG GCACGGCGTC GCCCGCACCG CCTGCGTTGC CCGATGCCGA GCTGTTTCCG CGCCACGCGA CGCCGGTGCC GGCGGCAGAA CGGATCACGG TCGACCGGAT CGCGACATGG AGTGCCGACG GCGGCACGCC CGTGCGCGGT GTCGTTGCCG GCGCGATGCT GCGCGACGGT ACGCAGATCC GCATCGCGAT CGCGCGCGAC ATGAGCGATC GCGCCGAACT GCTCGACGGC TATCGCGACA AGCTGAAGCT CGCCGGCGGG CTCGGCGCGC TGTGCGCGAT GCTGCTCAGC TACTGGCTGA TCCGCACGGC GCTCGCACCG CTGCGCGAGA TCGTCGCGAA CACCGGCCGG ATCACCGTCG ACAAGCTCGA CGCGCGGCTC GATGCCGCGC GCGCGCCGCG CGAACTGCGC GCGCTCGTCG ATGCGCAGAA CGCGATGCTC GGCCGCCTGC AGCAAGCTTT CGGACATCTG TCGCAATTCA GCGCCGATCT CGCGCACGAC CTGCGCACGC CGCTGAACAA CATGCGCGGC GCGACCGAGG TGGCGCTTGC GCGGCCGCGT TCGCCCGGCG AATACCAGGC GCTGCTCGAA TCGAATCTCG AGGAATACGA CCGTCTCGCG CGGATGATCG AGAACGTGCT GTTTCTCGCG CGCGCCGAAC ACCCGACCTT CGTGACGCGG CAGCGCGCAT TTGACGTGCA CGACGAGCTG ACGCGCATCG CCGAATACTT CGAAGGGCTC GCCGATGAAG CGGGTTCGAC GCTGCGTGTT GACGGGCACG GCCAGCTGAC TGCCGATGTC GAATTGTTTC GCCGCGCGGT CGGCAACCTG CTCGCGAACG CGCTGCGCTA TACGCCTGCG GGTGGTGTCA TCGCGCTGAG CGTCGACGAA ACGGCGGACG CGGTACGCGT CGTCGTCGAG AATCCGGGCG AGCCGATCGA TCCCGCGCTG CTGCCGCGCA TCTTCGATCG GTTCGTGCGC GGCGACCCCG CGCGCAGCGG CGGCGTGCCG GGCGGCACGG CCGGGCTCGG GCTCGCGATC GTGCGCTCGG TGATGGAGCT GCACGGCGGC ACCGCGCGCG TCGAAAGCGA TGCGGCGGGC ACGCGGTTCA TCCTCATCTT CGTCAGGAAT CCTGCGTCTT GA
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Protein sequence | MTLGRSLGAT LALAFGATML AVFALVGTYV YTGLERQVRT QDDLDIVLAA RHTRRLAGEL DSLDAVRAHA DRLTSQVLGN TALSMAVVDE RGNVLARHNV KRTEREDLPP AASGTASPAP PALPDAELFP RHATPVPAAE RITVDRIATW SADGGTPVRG VVAGAMLRDG TQIRIAIARD MSDRAELLDG YRDKLKLAGG LGALCAMLLS YWLIRTALAP LREIVANTGR ITVDKLDARL DAARAPRELR ALVDAQNAML GRLQQAFGHL SQFSADLAHD LRTPLNNMRG ATEVALARPR SPGEYQALLE SNLEEYDRLA RMIENVLFLA RAEHPTFVTR QRAFDVHDEL TRIAEYFEGL ADEAGSTLRV DGHGQLTADV ELFRRAVGNL LANALRYTPA GGVIALSVDE TADAVRVVVE NPGEPIDPAL LPRIFDRFVR GDPARSGGVP GGTAGLGLAI VRSVMELHGG TARVESDAAG TRFILIFVRN PAS
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