| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5741 |
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| Symbol | |
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| ID | 6181925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 263387 |
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| End bp | 264754 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641688877 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001815736 |
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| Protein GI | 172065024 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.814041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CGACCGAACC TCTCGCCCCG CCGCCGGCTG CCGAATCGGA AACGATGCAA
CGTGCCGCGC GCGGCGCCGC ACCAGAAACG CCGCCGCCCC GGCGCAGTCG CAAGCTGACC
GTCCCGCTTG CCGCGATTGC CGTCGCCGCC GCGCTGCTCG CGATCGGCAT CGTGCCGCGC
ATCGACGCGC GCGCCGCGCA GCGTCACCAG GTGGAGGCGC AGCAGGCGCT GCCGGTGACC
GTGATCCAGC CCGGCGCCGC ACCGGCCGAC CAGACGCTCA CGCTGCCGGG TGCCGTGACG
CCGTATGCGG AAGCGTCGAT CTACGCGCGC ACGAGCGGCT ACATCGCACA CTGGAGCGCG
GACATCGGCA CGCATGTGAA GGCCGGGCAA ACGCTCGCGC AGATCACCGC GCCCGACCTC
GACGCGCAAC TGCGCCAGGC GCGCGCGGAC GCGGCAACGG CGCAAGCGAA CTACGACTAT
GCGAAATCCA CCGCACTGCG CTGGCAGGAC ATGCTGAAGA CGCAATCGGT ATCGCAGCAG
GACACCGACA CGAAGGTGGC CGACATGAAC GCGAAGCGCG CGATGCTCTC ATCCGCGCAG
GCCAATACCG CCCATCTGAA CGAGCTCGTC TCGTTCGAAT CCGTGACCGC GCCGTTCGAC
GGCGTGATTA CCGCGCGCAA CGTCGACGTC GGCACGCTCG TCACGGCGGG CGGCACGCCG
GGCAGCCCCG GACTGTCGGG CGAACTGTTC CATCTGGAGC AGACCGACAC GCTGCGCGTG
TTCGTCGACG TGCCGCAGGA CAGCGCGGCC GGCGTCTCCA CCGGCACGGC CGTCTACCTG
ACCACGCAGC AGTATCCGGG GCGGCGCTTC GCCGCGCACG TCGCCCGCAG CGCGGGCGCG
ATCGACCCGG TCACGCGCAC GCTGCGCGTC GAGATCGACG TCGACAATCG CGATGGCGCG
TTGCTGCCCG GCGCGTATGC GCAGGCGCAT CTGCTCGTGC CGAGCGCGGC GCCTGCGTTC
GAACTGCCGG TCAGTGCGCT GCTGTACCGG CCGAACGGAG TGACGGTCGC CACGGTCGAC
GCGAATGGAC GCACGGCGCT GAAGACCGTG CAGATCGGGC GCGATTTCGG CACGCATGTC
GAGATCGTCG CGGGGCTCGG CGCGACCGAT CGCGTGATCG ACAACCCGGG CGATTCGATC
GCAAACGGCG AAACCGTGAA GATCGTGTCG GTCGAGCACG GCGCGGTGCC AGCGGCTTTG
CCGGCCGCGC AACCGGCCAC GGCAAGCGGC GTGCCGTCAG CGCCACGCGC GGCGACGTCC
GTGCCCGCCT CCGCGCCCGT TGCGCGTACC TCGAACGCCC GTACCTGA
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| Protein sequence | MNDTTEPLAP PPAAESETMQ RAARGAAPET PPPRRSRKLT VPLAAIAVAA ALLAIGIVPR
IDARAAQRHQ VEAQQALPVT VIQPGAAPAD QTLTLPGAVT PYAEASIYAR TSGYIAHWSA
DIGTHVKAGQ TLAQITAPDL DAQLRQARAD AATAQANYDY AKSTALRWQD MLKTQSVSQQ
DTDTKVADMN AKRAMLSSAQ ANTAHLNELV SFESVTAPFD GVITARNVDV GTLVTAGGTP
GSPGLSGELF HLEQTDTLRV FVDVPQDSAA GVSTGTAVYL TTQQYPGRRF AAHVARSAGA
IDPVTRTLRV EIDVDNRDGA LLPGAYAQAH LLVPSAAPAF ELPVSALLYR PNGVTVATVD
ANGRTALKTV QIGRDFGTHV EIVAGLGATD RVIDNPGDSI ANGETVKIVS VEHGAVPAAL
PAAQPATASG VPSAPRAATS VPASAPVART SNART
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