Gene BamMC406_5709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5709 
Symbol 
ID6181962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand+ 
Start bp218909 
End bp219496 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content59% 
IMG OID641688841 
ProductTetR family transcriptional regulator 
Protein accessionYP_001815705 
Protein GI172064993 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.92684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.162375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC CCTCCGCACG CGACCGGATA TTGGAAACCG CGGCGCGCCT GTTCTATCAG 
GACGGGTTCC GTGCCACGGG CATCGACAAG ATCATCGCCG AGTCAGGCGT CGCAAAAATG 
TCGCTTTACC GGCACTTCGC CTCCAAGAGC GAACTTATTG CAGCGTTCCT GGACCGTCGT 
CATGAGTTCT GGATGCGCTG GTTTGTCGAC GAGGTGGAAG CTCGTTTTGC TCAGCGTGCC 
GAGTTGTCCG TCGTCGCGGA AGCCCTAGGT GAATGGTTCG CGCAGGAAGA CTTCCGTGGT 
TGCGCCTTTA TCAATGTGGT CGCCGAAGCT GGATCGACGG GAGACCCAGG GCACCTTCAG 
CAGGCCGTAT CCCATAAGCA CGCGCTTGAG CAGTACATTT CTGAACTCGC TGGCCGCCTC 
GGGCTCCAGT CGCCTGCTAC CGTCGCCGCA GACGCGATGC TCTGCGTGGA AGGCATGATT 
GTGCGCTATC AGGTGACACA TGATTCGACA GTGGTGGATT CGGGCAAGCG TGTACTGGCG 
AGAATCGAAG AAGGCGCGTC GACAAGGCGA AGGTCTAAAG CTGCCTGA
 
Protein sequence
MSQPSARDRI LETAARLFYQ DGFRATGIDK IIAESGVAKM SLYRHFASKS ELIAAFLDRR 
HEFWMRWFVD EVEARFAQRA ELSVVAEALG EWFAQEDFRG CAFINVVAEA GSTGDPGHLQ 
QAVSHKHALE QYISELAGRL GLQSPATVAA DAMLCVEGMI VRYQVTHDST VVDSGKRVLA 
RIEEGASTRR RSKAA