Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5699 |
Symbol | |
ID | 6181952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 211136 |
End bp | 211855 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641688831 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001815695 |
Protein GI | 172064983 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0607724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAT GGCGAGAGTC GTTGCTGGCA AGCCTGGAGC AGGTGAAAAC AGCTTCCGAG GCATTCGATA ATCTTGCTCC GGCAGTCCGC GCACTGGGTT TTGAATATTA CGCATATGTG CTGAGGATCA CGATTCCGAT TACGAGGCCG GCCATCATGG GATGGAGCAA TTATCCGGAG GCCTGGCGCA CGCATTACAC GCAGCGGGAT TATCAGCACG CCGATCCGGT TCTTCATTAC GGACAGGCGT GTACGAGACC GATGCCCTGG CCGGGGCCGC TTCCCGGCTA CGACGCATTC TGGCGCGACG CCGCGGCTTT CGGCCTGTGC TACGGCTGGT CGCAGACCAC GCGCGATCAC CGCGGCGCGA TGGGCACCGT CAGTCTCGTG CGCGGCGGAC CGCCGATTGC GCCGGACGAG CTGCGGCGCA CCGAACCCGA GATGATCTGG TTTTGCCAGT TCGTTCACGC GACGATGAGC AATCTGATCG TGTCCGACGT GATGCCGAGC GGCGCCATGC GGCTGTCGCT GCGCGAAAAG CAGGTGCTGC ACTGGACCGC CGAGGGCAAG ACGGCGGCCG AAGTCGCCGT GATTCTTCAA TTGTCCGAGC GTAACGTCGG CTTCCACATC CAGAACGCGA TCGACAAGCT CGACGCGGCC AACAAGACGC ACGCGACGGT CAAGGCTGCG ATGCTCGGAC TGATTCCAGT CCGCTGCTAG
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Protein sequence | MNQWRESLLA SLEQVKTASE AFDNLAPAVR ALGFEYYAYV LRITIPITRP AIMGWSNYPE AWRTHYTQRD YQHADPVLHY GQACTRPMPW PGPLPGYDAF WRDAAAFGLC YGWSQTTRDH RGAMGTVSLV RGGPPIAPDE LRRTEPEMIW FCQFVHATMS NLIVSDVMPS GAMRLSLREK QVLHWTAEGK TAAEVAVILQ LSERNVGFHI QNAIDKLDAA NKTHATVKAA MLGLIPVRC
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