| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5692 |
|---|
| Symbol | |
|---|
| ID | 6182102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 205122 |
|---|
| End bp | 205496 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641688824 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001815688 |
|---|
| Protein GI | 172064976 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4308] Limonene-1,2-epoxide hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.122191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACG ATACGAAAGT GCTTGCCGAC CGCGTCATTC GCGCATTCGA GGCGCGCGAT
ATCCATTCGG TATCGGCGCT GCTTGCCGAC GACGTCCGTC TCGAGGACGT GCCGCTCGGC
GCCCATGTCG GCAAGCATGC CGTCGTCGAA AAGATAACGG ACTTTTTCGG CAAGGCGAGC
GCCTATCGTT GGGAGCGTCA CCGCGTGATC ACGCAGGACA ACACGGCGAT CGTCGAACGC
ACGAGCCATA TCGCGCTGGG CGGAAAGGAG ATTAAGCTGC CGATGCTCGT GATTCTCGAG
TTCGACGCGA ACGGCAAGCT GTCGCTCTTC AAGGACTATT TCGACCTGAA GACGCTGGAA
CAGCAGCTCG CATAA
|
|---|
| Protein sequence | MSNDTKVLAD RVIRAFEARD IHSVSALLAD DVRLEDVPLG AHVGKHAVVE KITDFFGKAS
AYRWERHRVI TQDNTAIVER TSHIALGGKE IKLPMLVILE FDANGKLSLF KDYFDLKTLE
QQLA
|
|---|
| |