| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5679 |
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| Symbol | |
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| ID | 6182089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 189438 |
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| End bp | 189998 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641688811 |
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| Product | Rossmann fold nucleotide-binding protein-like protein |
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| Protein accession | YP_001815675 |
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| Protein GI | 172064963 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000903991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0372691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGATCA TTGGCGTGAT GGGCTCGGGC AAGAACGAAT GGCCGGAGTT GGCGACGCCG
CTCGGAACGT GGATCGCCGC GCAAGGATTC GACCTGCTGA CCGGCGCCGG CCGCGGCGTG
ATGCTGTCGA TCGCGCGCGC GTACGCGACG ACGCCGGGGC GCCGCGGCCG CTCGATCGGC
ATCGTGCCGA GCGAAGCGCA CCCGCTGTTC GGCTTCGTGC CGATCGCCGG CTATCCGAAT
CCGTTCATCG ACCTGCCTAT CGTCACGCCA CTGCCGCGCA AGGAAGCGGA CGCGCCGGAC
GACGCATTGA GCCGCAACTA CGTAAACGTG CTGACGAGCG ACGTCGTCGT CGCGCTGCCG
GGGAGCAAGG GCACGCTCGA CGAGATCCGC CTCGCGACGC GCTTCGCGAA GCCGTTGATC
TGCACCGGGC CCGCGAGCGC GTTCGATGGC GTCGCGGCCG GCACGCGCAT CGTGTCGGCG
CTCGATGACG TCTATGCATT CGTGCTCGCG CACGTGAACC GCGCGGAAGG CGGCGCGGGC
GCACACGTTC CGTCGGCGTG A
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| Protein sequence | MAIIGVMGSG KNEWPELATP LGTWIAAQGF DLLTGAGRGV MLSIARAYAT TPGRRGRSIG
IVPSEAHPLF GFVPIAGYPN PFIDLPIVTP LPRKEADAPD DALSRNYVNV LTSDVVVALP
GSKGTLDEIR LATRFAKPLI CTGPASAFDG VAAGTRIVSA LDDVYAFVLA HVNRAEGGAG
AHVPSA
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